| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1755 |
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| Symbol | |
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| ID | 4604005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2146324 |
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| End bp | 2147421 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781119 |
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| Product | cation efflux family protein |
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| Protein accession | YP_927630 |
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| Protein GI | 119774890 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.763492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00874925 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATCGT CTATGAATGC CAAACCCTTT CACTCTGTTG CCCATTGGCA GCACAGTCAT
GACTTTTTTA AACACAACGA TGCTGGTGAA CGCAGTACCC GGATAGTCCT GGTGCTGACA
CTGGTGACCA TGGTGGCCGA GATCCTCGCT GGCACCGTGT ATGGCTCCAT GGCCTTACTG
GCGGACGGTT GGCATATGGG CACCCACGCC GCAGCTTTCC TTATCACCCT GTTTGCTTAC
CGCTATGCAC TGAAACATAA AGATGACCCG GCATTTGCCT TCGGAACAGG CAAGGTAAGT
GTGCTCGGCG GCTTTGCCAG TGCGGTTGCG CTGGGCTTAG TTGCGCTGAT TATGGTGATA
GAATCTGCGG TACGCCTGAT ATCGCCCCAT CAAATTGCCT TTGATGAGGC CATACTGGTG
GCGATTATTG GCCTGTCGGT CAACCTGCTC AGTGCGTTTC TATTGAAAGA CCACCATCAC
CATCATCATC ACCACCACGG GCACCATCAT GAAGAGGATG ACCATGAAAC CCATTTGCAT
CATCATGAAG AAGGCAACTG CCATCATGAT CACAGTCAAG TTGGTGCGGA TCACCACAGC
CATGAGCATC ATGATCATGA CCACGATCAC CAGCATCATC ACGGGCATCA CGACCACAAC
CTGCGTGCTG CCTATTTGCA CGTACTGGCC GATGCATTGA CGTCCGTGCT CGCCATTGGT
GCCTTGCTTG CGGGTAAATT CTTTGGTCTG GGCTGGCTCG ACCCGCTAAT CGGGATACTC
GGCGCCATCA TCATCGGCCG CTGGGCAGTA GGGCTTGTTA AAGACACGGG CCCCTTGCTG
CTCGACGCTG ACAACAACGA GAAATTACGG AAAAACGTGA TTCGTCTGGT GGCAAGCGTG
CCGGATCACG GGGTGTCCGA TCTGCATCTG TGGCGTATCA GTGCCGATCA TCGTGCCTGT
ATCCTGGGTG TTGTGAGCCA TCAACCCAAG TCCAGTGACT ACTTCGTAAA AAGGCTCAAG
GACGAGTTGG GTCTGCACCA TGTCACTGTT GAAGTACATT GCTGTGACTG CGAAGTCAGG
CCCTCATCGC AGGACTGA
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| Protein sequence | MPSSMNAKPF HSVAHWQHSH DFFKHNDAGE RSTRIVLVLT LVTMVAEILA GTVYGSMALL
ADGWHMGTHA AAFLITLFAY RYALKHKDDP AFAFGTGKVS VLGGFASAVA LGLVALIMVI
ESAVRLISPH QIAFDEAILV AIIGLSVNLL SAFLLKDHHH HHHHHHGHHH EEDDHETHLH
HHEEGNCHHD HSQVGADHHS HEHHDHDHDH QHHHGHHDHN LRAAYLHVLA DALTSVLAIG
ALLAGKFFGL GWLDPLIGIL GAIIIGRWAV GLVKDTGPLL LDADNNEKLR KNVIRLVASV
PDHGVSDLHL WRISADHRAC ILGVVSHQPK SSDYFVKRLK DELGLHHVTV EVHCCDCEVR
PSSQD
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