Gene Sama_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1652 
Symbol 
ID4603903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2016545 
End bp2016943 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content51% 
IMG OID639781015 
Producthypothetical protein 
Protein accessionYP_927528 
Protein GI119774788 
COG category[S] Function unknown 
COG ID[COG3603] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATTGA CCCTTGCCTT GCACGCCAGA CTTTACAGCA TTCACAGCTT CAGCCCGGAT 
ACACAGGTGC CTGCGGTTGT TTTTGCGCAG GAGATGTTTT TCATCGGTAA AACCCGGGAA
GAGCTCTCTG TGGTAGTGCC CTCAGAGCTC GAATTGGACA GCCTGGAAGC CGAAACCAAT
TGGATATGCC TCGAAGTGCT GGGCCCGCTG GGGTTTTCCA TGACAGGTAT TCTGTCACGC
ATATCGGGTA TTCTGGCTGA AAACCACATC AGCATTTTTG CCATATCCAC CTTTGACACC
GACTATATTC TGGTCAAAAA AGAGAAACGG GAGCTGGCGA TCGCGGCGCT GAAGAAAAAC
GGCTATCAGA TTATCGACCA TCCCCAATCT GCCGACTGA
 
Protein sequence
MRLTLALHAR LYSIHSFSPD TQVPAVVFAQ EMFFIGKTRE ELSVVVPSEL ELDSLEAETN 
WICLEVLGPL GFSMTGILSR ISGILAENHI SIFAISTFDT DYILVKKEKR ELAIAALKKN
GYQIIDHPQS AD