Gene Sama_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1595 
Symbol 
ID4603847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1947572 
End bp1947811 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content47% 
IMG OID639780951 
Producthypothetical protein 
Protein accessionYP_927472 
Protein GI119774732 
COG category 
COG ID 
TIGRFAM ID[TIGR02976] phage shock protein B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000140923 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTC CTATGCTGGC GTTATTTATC CCGATATTGG CCATTACCTG TGGTTTTGTT 
CTGCAATTTA TGCGTTTGCG GGAAAGGCAG CAGCTCCTCG GCAGCGAACA CAAGGCCGAA
CTTGCCATAC TTCACGGTGA AATCAATCAG CTCAAAAGCC GGATTGAAGT GCTGGAGAAG
TTGGTAACAG ATGAAGGGTT TGATCTTGAA CGCGAAATCA ACCGCATGAA AGGCGAATAG
 
Protein sequence
MSIPMLALFI PILAITCGFV LQFMRLRERQ QLLGSEHKAE LAILHGEINQ LKSRIEVLEK 
LVTDEGFDLE REINRMKGE