Gene Sama_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1546 
Symbol 
ID4603798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1882738 
End bp1883079 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content54% 
IMG OID639780901 
Producthypothetical protein 
Protein accessionYP_927423 
Protein GI119774683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0929269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTGGC GTATCATACT GATTGTAATG GCCTGTTTAT TAACCGGCGC CCACTTTTTA 
CGTTACGGAA ATCATCTGGC TGCGGCCGCT TTTGCCCTGG CACCGCTACT GTGCTTTGGT
CGGGTGATGG CTTTGAGAGC TTTGCAACTG CTGTTGGCAG CGGCACTGGT GTTGGTGTGG
GGCGTTGCAA CCTTTGATTA TGTCAGCCTG CGTTTGGCGG CAGATGCCCC CTGGCTGCGC
CTTCTTGCGA TCATGTCGGC GGTGATCCTG TTTGTTGGCG TTGCTGTGTG GAGCGTTGAA
GGGCTGATTG CTAAAAAACG ACAGCGCACC TTGTACCGTT AG
 
Protein sequence
MWWRIILIVM ACLLTGAHFL RYGNHLAAAA FALAPLLCFG RVMALRALQL LLAAALVLVW 
GVATFDYVSL RLAADAPWLR LLAIMSAVIL FVGVAVWSVE GLIAKKRQRT LYR