| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1525 |
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| Symbol | |
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| ID | 4603777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1855477 |
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| End bp | 1856163 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780875 |
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| Product | DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein |
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| Protein accession | YP_927402 |
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| Protein GI | 119774662 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCCC GGGCTTTTTT ACGCCCGCGC CTGTGGTGGC GCAGCCGTAC TCTTGACGAT
GGTCTTGCCC GCACCCTGGT AGACAGCCAG AGAGCACTGC TGAGTGCGAT GGCTGAATCG
GCTCCCATGC TGGCGCTTGA CCTTGAGATG ACAGGGCTCG ACCCCGGGCG GGATCAGATC
CTGGCCATCG GCGTAGTGCC CATCGACGGC GGCATTATCC AGCTGCAGGG CGCTGAGTCG
GTCTTGGTGG AAATTCAGGG CAGCGTGGGG CAAAGCGCCG TTATTCACGG GATCACAGAT
AGAGAGCTTC ACAACGCACT GCCATTGGCA GATGCCATGA ACTGGCTGAT GCAAAAAATG
AACGGCAGAA TACTGGTGGC CCACCATGCA CCTCTGGATT TGGCTTTTAT CCGCGCCAAC
ATGAGTCGCA GCCTCGGGAT CAGCATGCCA ATGCTGGCCA TTGATACCCT GGCGCTGGAG
AGGCAACGGC TACTGCGGAT ACATGACGCT ATCCAGGAGG GGAGCCTGAG ACTTGGCGCC
AGTCGGCAAC GATATGGCTT ACCGGTTTAC GACGCCCACA ATGCACTGAC CGACGCTTTG
TCCTGTGCTG AACTCTTGTT GGCACAGCTT GCGGCCATCG GCGGCGCCCA TACCCGCGTT
GCTGAGCTTG TCACCCTCTG CGACTAG
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| Protein sequence | MVSRAFLRPR LWWRSRTLDD GLARTLVDSQ RALLSAMAES APMLALDLEM TGLDPGRDQI
LAIGVVPIDG GIIQLQGAES VLVEIQGSVG QSAVIHGITD RELHNALPLA DAMNWLMQKM
NGRILVAHHA PLDLAFIRAN MSRSLGISMP MLAIDTLALE RQRLLRIHDA IQEGSLRLGA
SRQRYGLPVY DAHNALTDAL SCAELLLAQL AAIGGAHTRV AELVTLCD
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