| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1506 |
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| Symbol | |
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| ID | 4603758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1828047 |
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| End bp | 1830308 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780856 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_927383 |
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| Protein GI | 119774643 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase
[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT CAAAGCCCTT GATCTATCTC GACGCCAACG CCACCACTCC CGTATTACCC
GCCGCCGCCA AAGCCGCCAT GGATGCCATG GAGCATATCT ACGGGAATCC TTCCAGCAGC
CATATCACGG GTCTTCAGGC CAAAGCCCTG ATGGAACAAA CCCGCGCCGC CGCCCGCAAA
CAGCTGGGTT CCGGCACAGG TAAACTGGTA TTCACCAGCG GTGCAACCGA AGGCATTCAA
ACCGCTATTT TGTCGGCATT GGTGGCAGCC AGAGACACGG GCGTCCCTGC AGGCGCCTGC
TTGCTGTATG GTGCCACCGA GCACAAGGCT GTCCCCGAAT CCCTCAAACA CTGGAACAAG
GTACTTGGCA TCAATGCCGA TGTGTTGGCG ATTCCCGTGG ATACTCAAGG CCGGTTGGAT
ATGGCTTTTA TCCGCGACAA GGCCCCCAAC GCGCTGCTTA TCTGTACTAT GGCCGTGAAT
AACGAGACCG GTGTGTATCA GGATTTGGAT GCCCTTTCAC GTTGCATCAG ACAAGCCAAT
CCTACCGTTT TCTGGATGGT CGACTGTGTG CAGGCACTGG GAAAACTCGC TATCGATTTG
GCCAGCAGCG GCATCGACTA CGCGCCCTTC AGTGGCCATA AACTCTATGC CCCCAAAGGC
ATTGGCATGC TCTATATCCG CGACGGTGCG CCCTTTACCC CATTTATCGC CGGTGGTGGT
CAGGAAGGTG GCTTGCGTTC AGGCACTGAA AACCTGCCGG CCATGGCAGC GCTCAAGGTC
GTGCTGGATA TGCTCAATGG TGATGCTCAA GAGCGCTTTG AGTCCAAGGA AACCCTCAAG
GGCTATCGCC TCAAGCTGCT TGCGGCACTT GAGCAAGCCT TCGGTGAAGT GACGCTGAAC
CACAGCCTGG AAAACACGGT CCCTACCACC CTGAACTTTT CTATTGCGGG TTTTTCCAGC
AAGGAAATCA TGGATCTCTT TGATGCCGCC GGGCTCCGTG TCAGCTCAGG CTCTGCCTGC
AGCTCTAAAG TCACCCGCAG TTTTGTGCTG GATGCCATGG GATTACCCCG TTGGCAGAGT
GAATCGGCCA TTCGCCTCTC ATTTGGCCCG GCCATGACAG CGGCCGAACT GGAGGCAGCC
TGCGAACGTA TCGTGACTGC CGCGTCCTCC CTGACCCATT CCTGTCTACT CACCCGAGAC
TCCCGCAGCA CCGACGCAGA CCGCGAGCCG CTGCAAGGCC TGGTGCAGTT TAAAGACGAT
GGCGCCTGTT GCTGGGTATA CACAGACAAA GATAGCCGTG AAACCCTGAT AGTTGACCCG
CTGCCAGCGC TGAAACACCG TTTACTCAAT CTGGTGCGTT GCCAGGAACT CAAAGTCCTG
GCAGTACTGG ATACCCATGG CCATGGCGAC CATCAGAGCA TACGCAGCGA GCTCATCTGC
GAGCTTGGGC TAACAGACGC TTGCGACCAT CTGGGATGGC CTTTAAGCAG CAAAGGCCAG
ATGTGGCGTG GTGAACAGGT AAAGAGCCTG AGTGTCGGAA ACAAGACATT GGTTTCACTG
CCAAGCCCGG GTCACACAGA CGACAGTCAC AGCTTTATCA TGCTGGATGA TACACAGGCA
CCTCAATTTG CCTTTGTGGG CGATACTGTG TTGCCGGGCA GTATTGGCCG CAGCAACTTC
CCATCCTCTT CCAGTGTGGC ACTCTTTCAT ACCCTGAAGC GACTGCATAG CCTGTTGGGA
GACCAGAGCC TGCTGCTGTC TTCCCATGAC TATCACAACG ATTTCTTCAC CAATTTTGGC
GTCGAACTCA AACAGTCCGC ACTGCTTAAC GACGTCCTTA CCGGTGCCAT GGATGAAGCC
ACCTTTGTTG CCCGTAAAGA TGCCATGGAT GCGACTCTCA AGGATGTGCA GGGTGAGACC
ATCATGTGCG GTGCCTATGG CCAGTGCCAA CAGGCCAAAG GGGTGGAAGA GTATAGTGCT
GACACTCTGG AGCAGTTGCT TCACAGCAAT CCCGAAGCCC TGGTATTGGA CATTCGTGAA
CCTCACGAGT ATCAGCTATC CCATCGAGAG AGCCGCTGCG TTAACGTGCC CCTCACCCGC
CTGGCGGGGT TTGTGGCGCG GGAGCCAGGA GCACGCAGTA AGCCTCTGGT ATTGATTTGC
CGCAGTGGCA GCCGCTCGCT GGTGGCAGCA AAGGCTCTTG AGCGTTTTGG TTTCAGCGCT
GTTGCCCACG TGGCAGGGGG TTATGCCTTA AGTCAGTGCT GA
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| Protein sequence | MSQSKPLIYL DANATTPVLP AAAKAAMDAM EHIYGNPSSS HITGLQAKAL MEQTRAAARK
QLGSGTGKLV FTSGATEGIQ TAILSALVAA RDTGVPAGAC LLYGATEHKA VPESLKHWNK
VLGINADVLA IPVDTQGRLD MAFIRDKAPN ALLICTMAVN NETGVYQDLD ALSRCIRQAN
PTVFWMVDCV QALGKLAIDL ASSGIDYAPF SGHKLYAPKG IGMLYIRDGA PFTPFIAGGG
QEGGLRSGTE NLPAMAALKV VLDMLNGDAQ ERFESKETLK GYRLKLLAAL EQAFGEVTLN
HSLENTVPTT LNFSIAGFSS KEIMDLFDAA GLRVSSGSAC SSKVTRSFVL DAMGLPRWQS
ESAIRLSFGP AMTAAELEAA CERIVTAASS LTHSCLLTRD SRSTDADREP LQGLVQFKDD
GACCWVYTDK DSRETLIVDP LPALKHRLLN LVRCQELKVL AVLDTHGHGD HQSIRSELIC
ELGLTDACDH LGWPLSSKGQ MWRGEQVKSL SVGNKTLVSL PSPGHTDDSH SFIMLDDTQA
PQFAFVGDTV LPGSIGRSNF PSSSSVALFH TLKRLHSLLG DQSLLLSSHD YHNDFFTNFG
VELKQSALLN DVLTGAMDEA TFVARKDAMD ATLKDVQGET IMCGAYGQCQ QAKGVEEYSA
DTLEQLLHSN PEALVLDIRE PHEYQLSHRE SRCVNVPLTR LAGFVAREPG ARSKPLVLIC
RSGSRSLVAA KALERFGFSA VAHVAGGYAL SQC
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