| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1500 |
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| Symbol | |
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| ID | 4603752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1817720 |
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| End bp | 1819363 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639780850 |
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| Product | formate transporter |
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| Protein accession | YP_927377 |
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| Protein GI | 119774637 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTC ATCTTCACCA GCGTAAAACG CCGTTGGCGC AGTCGCGCTC GACCAAGGGG
GCGACGCCGC CCGAGACACG CGAAGGCGGC CTGATGGCCG ACATCTGTTA TGCAAGCCGA
AAGAAGCTTG CCAAGGGGCA GCGGCAACGG TTTGCCGAGG CCGTGTATGC AGGGATTTTC
ATCGGTCTGG GGTTTGTCTT TTACCTGACG GTGACCACCG GCAGCGCCGG TGCTCCATGG
GGCATGGTGC GTCTTGCCGG TGCACTCGCC TTCAGTTTGG GGTTGATGTT GGTGGTGCTG
CTGGGGATGG AGCTTTTTAC GGGCACAGTG CTGACCGCCA TCCCCTGGGC TCAGGGTTCC
GCCCGGTTAT CGACCCTGCT TAAAAGCTGG CTGTGCGTGT ATTGTGGCAA CGCCCTGGGG
GCACTGAGTC TGGCCGCCTT GGTGCTGCTT GCGGGTGTGT GGCAACTCGA TGGTGGGCTG
TGGGGAGTAA ATCTGATATC CACGGCCCTT CACAAGCTGC ACCACGGGTG GTGGGAGGCG
TTTTTCCTGG GGGTACTCTG TAACTTTTTG GTGTGCCTTG GGGTGTGGCT CAGTTTTCTC
AGTACTAACC CGGGTACCCG GGCGCTGCTC CTGATGCTGC CGGTGGCGCT TTTTGTCAGC
AGCGGCTTTG AGCACAGCAT TGCCAACCTG TTTTTGCTGC CTCTTGCCGG CATGCTGGCT
CAGCACATCC CGGATACGTT CCTGCTCACC CATGGCATTG AGCCGGCGCG GCTTGCTGAG
TTGACACCCG CCAACATGCT GCAACTGAAT CTGCTGCCCG TCACCCTCGG CAACATCGTT
GGCGGTGCTG TGCTGGTGGG GATGGGGCTC CTGGGCGTGC ACAGGTTGGG AGAGCGCTCG
GCGCAAGCTG TCTCTGCTGC CCCTGCAAAT TTTGGGGCCG GCCTGAGTTT GGTAACCACT
GAAGCCCACT TACCAGTTGG CGAAGGTGCG CCTACAGACC GCCGCTATTT CACGCAGGCA
AGCCGGTTCG CGAACACGCA TTTTACCCCC ACACCCAGTT CACCTTGTCT GACACCACTG
CCCGATGCGC TTCATCCTGC GGCAGCGTCA CCCTTATCTT TGGAGCAAAC CATGATGAAT
AAACACCTGA CTACCCTTAC CGTTGCTGCC TTGCTGGAGC CTGCAGTTAC CTTAACGCCG
GATATGAACC TGTGGCAGTC GTTGGCACTG ATGGAAAGTG CGGACGGCGT GTCCTGTCCT
GTGGTGGCCG ACGGTGGCCG CCTTGTGGGA ATGCTCGCCC CCCAGGACGC CATGCGGGGC
CTGTGGGCGG AAGAGTTTGC CGCCAATGGC AGCTACCGGG TGGGGGACAT GATGCAAAAA
GTACTGCATA CAGTCGCTGC CGATGAGCCG CTTTTGACAG TACTGGAATA CTGGGTGGTA
GACAGGCAGC GGCTCTTTCC GGTGACAGGT GAAGGGCATT GGCTGGGGAC GGGCTATCAG
GCCTATGAAG AGCGTCTGCG GGGCGCCGTG GCAGCAAGTC CCGCAACCTT GCCTGTGGTG
GAAGCCGGGG TGCTTAAGGG AATTATTCAC CGTGATGCCT TGCTGCGATT GCTGCAAAGT
GTCAGAGAAA AGCTGCCCGC ATAA
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| Protein sequence | MPTHLHQRKT PLAQSRSTKG ATPPETREGG LMADICYASR KKLAKGQRQR FAEAVYAGIF
IGLGFVFYLT VTTGSAGAPW GMVRLAGALA FSLGLMLVVL LGMELFTGTV LTAIPWAQGS
ARLSTLLKSW LCVYCGNALG ALSLAALVLL AGVWQLDGGL WGVNLISTAL HKLHHGWWEA
FFLGVLCNFL VCLGVWLSFL STNPGTRALL LMLPVALFVS SGFEHSIANL FLLPLAGMLA
QHIPDTFLLT HGIEPARLAE LTPANMLQLN LLPVTLGNIV GGAVLVGMGL LGVHRLGERS
AQAVSAAPAN FGAGLSLVTT EAHLPVGEGA PTDRRYFTQA SRFANTHFTP TPSSPCLTPL
PDALHPAAAS PLSLEQTMMN KHLTTLTVAA LLEPAVTLTP DMNLWQSLAL MESADGVSCP
VVADGGRLVG MLAPQDAMRG LWAEEFAANG SYRVGDMMQK VLHTVAADEP LLTVLEYWVV
DRQRLFPVTG EGHWLGTGYQ AYEERLRGAV AASPATLPVV EAGVLKGIIH RDALLRLLQS
VREKLPA
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