| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1471 |
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| Symbol | |
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| ID | 4603723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1779741 |
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| End bp | 1780943 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780821 |
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| Product | membrane-fusion protein |
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| Protein accession | YP_927348 |
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| Protein GI | 119774608 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.95991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGC TAATGTTATT GCCTCTGCTG CCATTGGCGC TTTTGGCGGG CTGTCAGGAA
TCCACGGAAA CCGCAGTTCT CACCATGAAA GTCAGCCGCA GCGACTTCAA GGTGGAAATA
CCGGCCCGTG GCGAGCTTGA AGCCAAAAGT GCCACACCCG TGTCGGTACC CGGTGGGCTT
CGTGGTCCCC AATCCCTTGC CTGGGTTCTG GACAATTTTT CTGAGGTGAA GGCCGGGGAT
GTGGTTGCCA GACTCGATGG CCGCCGCGAG ACCCTGGAGC TTGAGCTTGA AAAATACGAT
TTCGACAAGC TGGCGCTCGA TGGCGACATT CAGGTCGAAA AGAATCTCAC CACGGCTCAG
GAGCTGGTGA TAGGTCGGGA CGTGACCGAG GAGGAACTCA GCCTGTCGGA ACGCTTTTTC
ACCGATGATG AGCGGGTGTA CACCAAAATC GACATCATTG ATCAGATGCG TAACAAGGAT
TATCTGCAGG CGCGTTTGGG GTATTTCGAT TGGGGCAAGG GGAGCCATGA TGCCCAGGCA
ACCGCAGAGC TTGACCTTAT CCGATTGAAA CAAAAAGGGA TACAGGCAAA AATTGCCACC
TACCAAAACA ACCTGTCCCA GATGGAAATC ACGGCGCCCC ACGATGGCCT GTTTGTTATG
CAGCCCGGTT GGAGCGGCGC CTTGCCCATG GCCGGTGACA TGGTGTGGTC GGGGATACCG
CTTGGCACCT TACCGGATAC CTCTGTGATG CAGGCAAAAC TCTGGGTGCT TGAGTCAGAG
GCGGTGGGAC TGGCGGTAGA CAAGCCCGTG GTACTGACTC TGGATGCGTA CCCGGATAGA
CCCTTTACCG GCAAGGTGAC CCAGGTGGAT GCCCTCGCCA AGCCAAAAGA CAGGGACAGC
CCGGTTAACT ATTTTGAGTT CACTGTGGCG CTGGATAACA CCGACACCCA AATCATGTTA
CCCGGTCGCC AGGTGCAGGC AAGGGTGTCG GCCCTGAGTG AAGACCAGGT ACTGGCCGTG
CCCAATCAGG CCATCTTTCA GCGTGAAGGC CGCTACTGGG TGTATGTTAA ATCCCCGGAT
GGGTTTATCG AGCAAACGGT TACCCCCGGC AGTCGCAGCC TGAATCGAAC CGTGATCCTT
GAAGGCCTGA AAGAAGGGGA TGTGGTCGCC CTGACAGTAC CGCGCAGGAG AACACAGGCA
TGA
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| Protein sequence | MKRLMLLPLL PLALLAGCQE STETAVLTMK VSRSDFKVEI PARGELEAKS ATPVSVPGGL
RGPQSLAWVL DNFSEVKAGD VVARLDGRRE TLELELEKYD FDKLALDGDI QVEKNLTTAQ
ELVIGRDVTE EELSLSERFF TDDERVYTKI DIIDQMRNKD YLQARLGYFD WGKGSHDAQA
TAELDLIRLK QKGIQAKIAT YQNNLSQMEI TAPHDGLFVM QPGWSGALPM AGDMVWSGIP
LGTLPDTSVM QAKLWVLESE AVGLAVDKPV VLTLDAYPDR PFTGKVTQVD ALAKPKDRDS
PVNYFEFTVA LDNTDTQIML PGRQVQARVS ALSEDQVLAV PNQAIFQREG RYWVYVKSPD
GFIEQTVTPG SRSLNRTVIL EGLKEGDVVA LTVPRRRTQA
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