| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1469 |
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| Symbol | |
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| ID | 4603721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1777583 |
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| End bp | 1778563 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780819 |
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| Product | multidrug resistance efflux pump-like protein |
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| Protein accession | YP_927346 |
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| Protein GI | 119774606 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.908196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAACC CAAAACCGCT CATTATTGCC TTGGCGCTAT TACCTTTTTT CAGCCCTGCC
GCCAAGTCAC AGGCCCTGTG TGGCAGCGGT GAGCAAAGCT TGCTGCTCAC CGGCAGCATC
AGTTCAGCCA AGTCGCAACC CTTTGCTGTG CCCAAGGCCG GTGACTCCTG GCGTCATCAA
ATTCAGTGGC TGTTTCCCGA AGGCAAATTG GCCAGGGTCG GTGACACCAT AGTCATTTTC
GACAAGAGCC AGATTGCCAA CCAGATAGAG CAGCTGGAAG CCAGTTTACT CAGAGTAAAA
GCCCAGGAAC AAAGCCAGGG CATAGATCTG GAATCGGCCT TGCTCTCTGC CCGGTTTGAG
GTGCGCCGCG CCACCCTGGC GGTGGAAAAA GCCCGTCTCG ATGCATCTGT ACCGGCCGAA
TACATAGCCG CAAAAGAATA CGCTGACAAC CAGTTCAAAT TACTCCAGGC GAATACCGAG
CTTGAAAAGG CCAATCAGGC GCTGAAAGAA GCCATCGAGA AGCGCAAGTC GAGCCTTGAG
CAATTGGCGA TAGAAAAACG TAAGGCAGAA GTCGAACTGA GCGCCGCGCT CGCGGCACTG
GATGCACTGG AATTAAAAGC TGAAATTGCC GGGCCCGTGA TCATTGGCCG CGACTGGAAC
GAAAAGAAAT ACCAGGCCGG TGATACGGTG CAATTTGGTC GCCAGATTGC CAGTATTCCT
GCGCTGGATG GTCTAGAGGC CTCCGCATGG GCCAATGAAG TCGACGTGGA TAAAATTCGC
CTGGGTCAGG CGGTATGTCT GTCGCTGGAT GCCAAGCCAG GCCTCCAGGT TCAGGGCAAG
GTGGCCAATA TAGGACGTCA GGCGGTGACC AAGAGCGCCT GGGGGCAGAG CAAATGGTTC
AGAGTCGAGG TGGCCTTGAG TGATACAGCG GGGCTTGAAC TGTCGCCTGG AATGAGCGTG
ATGGTGGAGG TACACCCATG A
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| Protein sequence | MVNPKPLIIA LALLPFFSPA AKSQALCGSG EQSLLLTGSI SSAKSQPFAV PKAGDSWRHQ
IQWLFPEGKL ARVGDTIVIF DKSQIANQIE QLEASLLRVK AQEQSQGIDL ESALLSARFE
VRRATLAVEK ARLDASVPAE YIAAKEYADN QFKLLQANTE LEKANQALKE AIEKRKSSLE
QLAIEKRKAE VELSAALAAL DALELKAEIA GPVIIGRDWN EKKYQAGDTV QFGRQIASIP
ALDGLEASAW ANEVDVDKIR LGQAVCLSLD AKPGLQVQGK VANIGRQAVT KSAWGQSKWF
RVEVALSDTA GLELSPGMSV MVEVHP
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