| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1446 |
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| Symbol | |
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| ID | 4603698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1756407 |
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| End bp | 1757039 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639780796 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_927323 |
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| Protein GI | 119774583 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0398792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAAGA TAATACATTG GATGGTGGTA TCTCGTTCAC ACTTGTTGGG TGATTTACTG
GACTGCCGTT GGCCACAGGA ATTTTTGGTC AAGCTGACCA AAGCGGCGCC AGAAGAGATG
TGTAACAAGT TGCACCTCAG TCAGGTTTCT CTGGTGGTGA TTGACCTGGC CTCGGTAGAC
TTGCAAAAGG CCTATCAGCT GCAGAAGCAT ATCGAAAGGG AATATTCGTC CATTAAGGTG
GTGTTTATCC ACTTCCCCCG TCAAACCGAC GCGCGTTTCC TCGTTAATCA ATCCGTTACA
GCAGGCGTAT TTTTCTTTGA CGCCAGTCTG GCCGATATCG GTGAAGGTCT TGGCGAAATC
CTGAAAGGTC GCAGCCAAAT TCCGGCACAG TTACTGCGCA GCAGCAATGG TGAAGATTAC
GAAGAAGACA GTGAAAAACT GACCATTCGT GAACGTGAAG TGCTGCAGGC ACTCTTGTCG
GGGAGCACTA ATCTGGACAT TGCCAATCGG CTTTTCGTCA GTGAAAGCAC CATCAAAACC
CATCTTTACC GTGCATTTCG CAAGATTGGC GTTTCCAGTC GCGGTCAGGC TATCGCCTGG
GCTCAAACCC ATTTGCACGA AGTGCATGTT TGA
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| Protein sequence | MFKIIHWMVV SRSHLLGDLL DCRWPQEFLV KLTKAAPEEM CNKLHLSQVS LVVIDLASVD
LQKAYQLQKH IEREYSSIKV VFIHFPRQTD ARFLVNQSVT AGVFFFDASL ADIGEGLGEI
LKGRSQIPAQ LLRSSNGEDY EEDSEKLTIR EREVLQALLS GSTNLDIANR LFVSESTIKT
HLYRAFRKIG VSSRGQAIAW AQTHLHEVHV
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