| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1414 |
|---|
| Symbol | |
|---|
| ID | 4603666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1716490 |
|---|
| End bp | 1716903 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639780764 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_927291 |
|---|
| Protein GI | 119774551 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3832] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0194665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA CAGTACAAAC CCTGATTGAC GCCCCTATTG CCATTGTGTG GCAAGCCTGG
ACAACCCCCA GCCATATTTG CCAATGGAAT TTTGCGGCCG ACAGCTGGTG CTGCCCCGCA
GCAGAAATCG ATCTGCGTGA AGGGGGCACA TTCAGTTATC GGATGCAGGC CCGTGACGGC
TCCATGGGCT TTGATTTTAG CGGCACCTTC ACCAATCTTA TCCCCGGCAG CGCCCTGACG
TTTGTGATGG AAGATGGTCG CGAAGTACAG GTGATCCTGC GTCAAACCAA GGAAGGCGTG
CTGCTGGAGG AAACCTTCGA CAATGAGGAC CAACATACCG CTGAGCAGCA GCGCCAGGGC
TGGCAGGCTA TCCTGGACAA CTTTAAGCAA CACGTAGAGT CCCTTCGCAG CTGA
|
|---|
| Protein sequence | MKTTVQTLID APIAIVWQAW TTPSHICQWN FAADSWCCPA AEIDLREGGT FSYRMQARDG
SMGFDFSGTF TNLIPGSALT FVMEDGREVQ VILRQTKEGV LLEETFDNED QHTAEQQRQG
WQAILDNFKQ HVESLRS
|
|---|
| |