Gene Sama_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1412 
Symbol 
ID4603664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1715337 
End bp1715909 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content53% 
IMG OID639780762 
Producthypothetical protein 
Protein accessionYP_927289 
Protein GI119774549 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.320484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0206286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA CTCTGACCCG TGGACTGATG AACGTATTGC CCATGGCACT TAGCCTGTGG 
CTTTTCTGGT CGCTATTCGT GTCGCTGGAT GAGTTGGGTG TCTTGCTGCT GGAGTTGGTG
GGCTTACCCA AGCTGTTTGT GGGTGAGGGC TTCTTGCTGG TGATAGCCCT GGTATTCTCT
GCCGGCTTGC TGTTTTCCGT CAGCCCCATC CAATGGATAT GGGGCAAGGT TGAGCGCGCG
CTGATGCGCT TTCCACTGTT TAAGTCTGTG TATGGCAGTA TCAGAGACAT AGCGTCTTTG
ATGAACCGTG ATGGCAAGCC AAAGGATCAG CAGGTGGTAC TGGTCAAACA GGCCAATGGC
GGATACGTGG TGGGCTTTAT CATGACTGAT AAAGCGCCTG AGCCTGTATC ACAGGCGCTG
GGGGACGGCG ACTGGGTGCC CGTGCTGTTT CAGCTTTCCT ATCAAATGGC CGGTGTCACT
ACCCTGGTTA AGCGTGAAGA CCTTATCAAG GTTGACTGGA GCTTTGAAGA AGCCATGCGT
TTTAACCTGA CTGCCGGTCT GTCAAAGTCC TGA
 
Protein sequence
MKTTLTRGLM NVLPMALSLW LFWSLFVSLD ELGVLLLELV GLPKLFVGEG FLLVIALVFS 
AGLLFSVSPI QWIWGKVERA LMRFPLFKSV YGSIRDIASL MNRDGKPKDQ QVVLVKQANG
GYVVGFIMTD KAPEPVSQAL GDGDWVPVLF QLSYQMAGVT TLVKREDLIK VDWSFEEAMR
FNLTAGLSKS