Gene Sama_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1369 
Symbol 
ID4603621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1660919 
End bp1661326 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content52% 
IMG OID639780719 
Producthypothetical protein 
Protein accessionYP_927246 
Protein GI119774506 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.741634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.126231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAGCA AAATTGCCAA AGCGGGCCGG GTTATGGCCG CCCTGTGTAT ACTCGGCGCC 
CTGAGCGCCT GTGTGACGGT AGAGGAGCCC AAACCCATAA TCATTAATGG CGCGGCGGGT
TATCTTGAGT CTGTGGTGTT GCCGCCAAAC AGCACCATTA CCATTGCGGT TATCGATTTA
GACACCCCCG GCATTATCAT CGCTCAGAAA ACCTTTAATG TGGTGCGCGC GCCAGTGCCC
TTCAAGTTTA TTTTGCCGGC CGAGACTATC AGCAGCAATG TGAACTACGG GGTGGTGGCA
CTTATCAAAC ACAACAACCA GGTGATTTTC CAAACCTACG ATCGCTTTCC GGTGATCCAC
AACAACAAGT TCACCACCGA AGTGGTGATG AAGCCGGTTG GCAGGTAA
 
Protein sequence
MWSKIAKAGR VMAALCILGA LSACVTVEEP KPIIINGAAG YLESVVLPPN STITIAVIDL 
DTPGIIIAQK TFNVVRAPVP FKFILPAETI SSNVNYGVVA LIKHNNQVIF QTYDRFPVIH
NNKFTTEVVM KPVGR