Gene Sama_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1304 
Symbol 
ID4603556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1588539 
End bp1588982 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content53% 
IMG OID639780654 
Producthypothetical protein 
Protein accessionYP_927181 
Protein GI119774441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.281387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0615794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA TCAAGAAAAC CGCCGCCGCA GTTGCACTGG GAAGCGTTGT TGTGGGCGCA 
GCGTTTGCCG CCGAAGCGCA GGCCAACCCT TTTGGCTTCA ATGAAATGCA AGCTGGTTAC
CAACTGGTGG GTGACGAAGG TAAATGTGGT GAAGGCAAGT GTGGTGAAGG CAAGAAGGCC
AAAGAGGGTA AGTGCGGCGA GGGTAAATGC GGTGAGGGCA TGAAGGCCAA AGAAGGTAAG
TGCGGTGAAG GTAAGTGTGG CGAGGGCATG AAAAAAGGCC ATGAGACTGC CGAAAAAGCC
AAAGAAGGTA AGTGCGGCGA AGGCAAATGT GGCGAAGGCA TGAAAAAAGG CCAGGAAACT
GCCGAAAAAG CCAAAGAAGG TAAGTGTGGT GAAGCCAAGG GCACTGAAAA AGCCAAAGAA
GGCAAGTGCG GCGGCGCTCA CTGA
 
Protein sequence
MNSIKKTAAA VALGSVVVGA AFAAEAQANP FGFNEMQAGY QLVGDEGKCG EGKCGEGKKA 
KEGKCGEGKC GEGMKAKEGK CGEGKCGEGM KKGHETAEKA KEGKCGEGKC GEGMKKGQET
AEKAKEGKCG EAKGTEKAKE GKCGGAH