Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1302 |
Symbol | |
ID | 4603554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1586764 |
End bp | 1587117 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780652 |
Product | TraR/DksA family transcriptional regulator |
Protein accession | YP_927179 |
Protein GI | 119774439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.893373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0630763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTATAG CCAATACCAG ACAAGCTTTA TCACAGCTTG AAGCCACACT CAGGGAAGAG ATAGCGGCGC TCCCCTTCCC CGAGCTACAA GGCTCGGCCT TGAAAGCCTC GCTGAGCGAG CTTATCGATA CCCTTACCCG ACTGCACCTA GCGGATGATC TCATCTATGA CAGGTTAACC CGTTTGGATG CGGCGCAGTG TCAGTTGGAT TTAGGACTCT ACGGCCTGTG TGCCGATTGC GAATCCGAAA TAGAGCAGGA TAGGTTGATA CGGGATCCCA CCGTTCAGCG TTGCCTGTCC TGTGACGACC ATTATCGCCA CGAACACAGA CACGAGCTGC GGCTCAATCA CTGA
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Protein sequence | MTIANTRQAL SQLEATLREE IAALPFPELQ GSALKASLSE LIDTLTRLHL ADDLIYDRLT RLDAAQCQLD LGLYGLCADC ESEIEQDRLI RDPTVQRCLS CDDHYRHEHR HELRLNH
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