Gene Sama_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1302 
Symbol 
ID4603554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1586764 
End bp1587117 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content54% 
IMG OID639780652 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_927179 
Protein GI119774439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.893373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0630763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTATAG CCAATACCAG ACAAGCTTTA TCACAGCTTG AAGCCACACT CAGGGAAGAG 
ATAGCGGCGC TCCCCTTCCC CGAGCTACAA GGCTCGGCCT TGAAAGCCTC GCTGAGCGAG
CTTATCGATA CCCTTACCCG ACTGCACCTA GCGGATGATC TCATCTATGA CAGGTTAACC
CGTTTGGATG CGGCGCAGTG TCAGTTGGAT TTAGGACTCT ACGGCCTGTG TGCCGATTGC
GAATCCGAAA TAGAGCAGGA TAGGTTGATA CGGGATCCCA CCGTTCAGCG TTGCCTGTCC
TGTGACGACC ATTATCGCCA CGAACACAGA CACGAGCTGC GGCTCAATCA CTGA
 
Protein sequence
MTIANTRQAL SQLEATLREE IAALPFPELQ GSALKASLSE LIDTLTRLHL ADDLIYDRLT 
RLDAAQCQLD LGLYGLCADC ESEIEQDRLI RDPTVQRCLS CDDHYRHEHR HELRLNH