| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1258 |
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| Symbol | |
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| ID | 4603510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1545780 |
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| End bp | 1546400 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780608 |
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| Product | TonB-like protein |
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| Protein accession | YP_927135 |
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| Protein GI | 119774395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.973667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0001567 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGAGAG CACTAGTATC TATCATTATT GGTGCTTTGG TGACATTTGG TTTGTTCTGG
TTCATGGCTG CCTTGGTGGG GGGCGGTGCT CAACGCGCCG ATACCTCCTC CGAAACCCCG
GTGATTGAAA TCACCATGGA CAGGCAGGAT GCGAAAGCGC AGAACAAACC AAGGGTGGTC
CCAAAGCCGC CCCCACCACC AGAGCAACCG CCCAAGCCGG ATACAACGCC ACCAGACACA
TCGAGTAATA TCGATACTGG CCTGACCTTT AACATGGGTG GGCTTGAGTC AGGCGGTGCC
AGCACAGGGC TTAAATTGGG TAACATGATG ACACGTGACG GTGATGCAAC ACCTATCGTG
CGGATTGAAC CCCAATACCC GATTGCTGCG GCTCGCGACG GTAAGGAAGG TTGGGTACAA
CTGCGCTTCA CCATCAACGA GATTGGTGGT GTGGATGACG TAGAAGTTAT CGCTGCAGAG
CCCAAGCGCG TATTCGATAA AGAAGCGATT CGTGCACTGA AAAAGTGGAA GTACAAGCCT
AAAGTTGTTG ATGGCCAAGC CCAGAAGCAG CCCGGCATGA CTGTACAACT GGACTTTAAA
CTGGATAAAG GAGGCAAATA A
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| Protein sequence | MLRALVSIII GALVTFGLFW FMAALVGGGA QRADTSSETP VIEITMDRQD AKAQNKPRVV
PKPPPPPEQP PKPDTTPPDT SSNIDTGLTF NMGGLESGGA STGLKLGNMM TRDGDATPIV
RIEPQYPIAA ARDGKEGWVQ LRFTINEIGG VDDVEVIAAE PKRVFDKEAI RALKKWKYKP
KVVDGQAQKQ PGMTVQLDFK LDKGGK
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