| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1233 |
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| Symbol | |
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| ID | 4603485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1517353 |
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| End bp | 1518243 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780583 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_927110 |
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| Protein GI | 119774370 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAAA TTAAGATTTA TCAGGAAGAC GACATTCCGT CTCCCATGAG GCGGCTATGG
CAGGCGTTTG CATCCAACCC CTTCGCCCTG GCGGGGCTTT GGGTCATCAT CGGGCTGCTG
TTTTTCACCC TGTTTGGCCC CTGGCTGGCG CCCTTCAGTC CGGAAGCACA AAACCCCAAA
GCCTTGCTAT TGCCACCCTC CTGGGATCCC GCAGGTACGG TGGAACACTT TTTGGGTACC
GATGACCTGG GGCGGGATAT ATTCAGCCGC ATCCTTCATG GTGTGCAGCT GACATTCGGC
ATGTCGTTGG CCGTGGTGAT TACCGCGCTG CTGCTTGGCT TTGTCATAGG TGCCATTTCG
GGCATGATGA AAGGGCTTAA ATCCAGTATT CTCGGTCACC TGCTGGACGC GCTCTTGTCC
ATTCCATCAC TTTTAATGGC CATCCTGGTC GTCGCTGTAC TGGGGCCGGG GCTTGGCAAC
GTATTTTGGG CTGTGGGTAT TGCCCTCACC CCACAATTTG TGCGCGCCAT TCATCAGGCC
ATCCATGAAG AACTGCAAAA AGAATATGTC ACTGCTGCTC GCCTCGATGG CGCCAACAGT
GCCCAGATTT TCTGGTACGT GATCATGCCG AACGTCTGGG AAGTGGTCAT TATTCAAACC
ACGCTCGCCA TTTCCACCGC GATTCTGGAT ATAGCCGCTT TGGGCTTTCT TAATCTGGGA
GCTCAGGCGC CCAGCCCCGA GTGGGGTGCC ATGGTATTTC AGGGCTTGGA TAACCTGCTT
ACCGCCCCCT GGACCATGAC CATTCCCGGG CTCGCGATAC TCTTTACCGT GCTTGCCGTT
AATTTGGTGG GCGATGGATT ACGCTCGGCC CTTGCGCCGA TAAAGAACTG A
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| Protein sequence | MPQIKIYQED DIPSPMRRLW QAFASNPFAL AGLWVIIGLL FFTLFGPWLA PFSPEAQNPK
ALLLPPSWDP AGTVEHFLGT DDLGRDIFSR ILHGVQLTFG MSLAVVITAL LLGFVIGAIS
GMMKGLKSSI LGHLLDALLS IPSLLMAILV VAVLGPGLGN VFWAVGIALT PQFVRAIHQA
IHEELQKEYV TAARLDGANS AQIFWYVIMP NVWEVVIIQT TLAISTAILD IAALGFLNLG
AQAPSPEWGA MVFQGLDNLL TAPWTMTIPG LAILFTVLAV NLVGDGLRSA LAPIKN
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