| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1202 |
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| Symbol | |
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| ID | 4603454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1475050 |
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| End bp | 1476024 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780549 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_927079 |
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| Protein GI | 119774339 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.952705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCCT ACGGATATCA CTCATTTCGT GACATACAGG TCAACGAAAT TGACTGGCTG
AGGTGGCAAC GGCTTGTGGA TACAGTCGCA GAGATGTTCC ACGCACCCGC AGCCTTTATC
AATCAGGCCA ACACCAAAGG GATAGAGGTG CTGATAGCCT CAGAACTCCC CACCACGCGT
TATTCCCCAG GACATATCGC CACCATAGAC CAAAACGTTT ATAGCCACTA TGTGGTGCAA
AAAAATCAGC TGCTGTATGT ACCGGATGCA AGCCAGGATC CCCGTTGGCA TGACAATCCG
GAATTTCAGG ACGATCACTA TATCTCCTAT CTGGGTATGC CCATCATCTG GCCCGACGGC
GATACCTTTG GCACCCTGTG CGTATTATCC GATGTAGTCA CCCAGTACCC TGCCACCTAT
TTAAAGGTGC TCAATGTCAT TCGTGATGTC ATCAACGCCG ATTTGGCTCA CATGTACCGA
GAAAACCAGC TCCTTAATCA AAGCTATCTT GACCCTCTGA CCAAAATCTA TAACCGCCGG
GGCTTTGAAG AGTTGTTTGA AAAGAACCAG CAGCTGGCAC TGCGTCTGGG CCGTAAAATG
GTATTGATCA GTTTTGATTT GGATGGCTTC AAACCCATCA ATGATAATTA TGGCCATATC
ACGGGAGACA AGATCCTGGC TTTTTTTGCA ACCAGTCTGA AATCGAGCTG CCGGGGCAGT
GATTTGGTTG CCCGCTGGGG CGGTGATGAG TTTTTAGTGC TGGCCCACTC GGAAACCGAG
CAGTTGGAGA ACTCGGTATT GCTAAGGCTG GATGAACACC TGGCCCACCA AAACCAGCTG
CCTAAATTTG ACTATTCCGT TGGTATGCTG CAACTGGACC CGGCCACCCA TTACGAACTC
GACAGCTTAC TGCCAAGCGT CGATGCCCGC ATGTACCACC ACAAGCGCAC CAAACAGACA
AAACAACGCC AATAA
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| Protein sequence | MRAYGYHSFR DIQVNEIDWL RWQRLVDTVA EMFHAPAAFI NQANTKGIEV LIASELPTTR
YSPGHIATID QNVYSHYVVQ KNQLLYVPDA SQDPRWHDNP EFQDDHYISY LGMPIIWPDG
DTFGTLCVLS DVVTQYPATY LKVLNVIRDV INADLAHMYR ENQLLNQSYL DPLTKIYNRR
GFEELFEKNQ QLALRLGRKM VLISFDLDGF KPINDNYGHI TGDKILAFFA TSLKSSCRGS
DLVARWGGDE FLVLAHSETE QLENSVLLRL DEHLAHQNQL PKFDYSVGML QLDPATHYEL
DSLLPSVDAR MYHHKRTKQT KQRQ
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