| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1197 |
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| Symbol | |
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| ID | 4603449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1467421 |
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| End bp | 1468428 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780544 |
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| Product | putative ROK-family protein |
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| Protein accession | YP_927074 |
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| Protein GI | 119774334 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.517642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTACG GACTGGATAT CGGCGGCACC AAGATTGCGC TCGCCTTATT TGATGACAGC
ATGGCTTGTG TTGAGCGCTG GCAGATCCCG ACCCCTGTGG CCGATTATGG CCAGTTTTTG
GATGAGGTCT GTGCCCAAAT TGAGCGCGCC GATGAATTGG CGCAGCAGCA CTCGGGTGTG
ACCGTGCAGC CAGCCGAAGT CTCCAAGGGC TCTGTGGGTA TTGCACTTCC CGGGGTTATT
CTCAGTGACG GCACTGTGCT CTCAAGCAAT GTGCCTTGCC TCAATGGCCG CACTGTGGCT
CAGGAGCTCA CCGTCCGGCT TGGCAGGCCG GTTGCGCTTG GGAATGACTG CCGTTGCTTT
GCTCTATCTG AAGTCTTGCT TGGCGCCGGC GTGGGCTTTG AGCGAGTGCT CGGGGTGATC
CTCGGCACTG GCCTCGGCGG CGGTGTTTGT ATCAGTCAGA AACTGATTTT AGGCGCCCAC
TGTCTCGCCG GGGAGTTTGG CCATATTGGC CTGCCGGCCT CTGTCATCAT CAAACATCAA
CTGCCGCTGT TCGAATGTGG CTGCGGCTTA ACCGGCTGCG CCGAGACCTA TGTCTCGGGT
ACCGGCCTTG GCCGCCTGTA CCAGCATTTT GGCGGCACCG CCGATACCTA TGTCTGGCTT
GCGGATTACC GGTCGGGCAA GGCTGAAGCC ATCAGCACCT TTGATGCCTA TATGGATGCC
CTTGGCAGTG TGCTTGCGGG GCAAATTCTC AGCCTGGATC CCGACTGCCT GGTGTTTGGT
GGTGGTATTT CCGAAGTGAA GGAAATCATT GCAGCCTTGC CCGACGCAAC CGCAAGGCAT
CTCTTTGCCA GCGCCAAATT GCCGGAATTC CGGGTGGCCG AGTTTGGCGC GGCCAGCGGG
GTACGCGGGG CCGCGCTGCT GGGTAAGGCG CTCAGCGAAG ATTACCTTGC TGACGCTCTC
AGCGTAGAAA TGGGGCCCGA AGAACTTCAA AGGAGGCTCC ATGGCTGA
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| Protein sequence | MHYGLDIGGT KIALALFDDS MACVERWQIP TPVADYGQFL DEVCAQIERA DELAQQHSGV
TVQPAEVSKG SVGIALPGVI LSDGTVLSSN VPCLNGRTVA QELTVRLGRP VALGNDCRCF
ALSEVLLGAG VGFERVLGVI LGTGLGGGVC ISQKLILGAH CLAGEFGHIG LPASVIIKHQ
LPLFECGCGL TGCAETYVSG TGLGRLYQHF GGTADTYVWL ADYRSGKAEA ISTFDAYMDA
LGSVLAGQIL SLDPDCLVFG GGISEVKEII AALPDATARH LFASAKLPEF RVAEFGAASG
VRGAALLGKA LSEDYLADAL SVEMGPEELQ RRLHG
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