| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1188 |
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| Symbol | |
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| ID | 4603440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1452647 |
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| End bp | 1456207 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780535 |
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| Product | hypothetical protein |
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| Protein accession | YP_927065 |
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| Protein GI | 119774325 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.78018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAC ACACACTTTC CTTCGAATGG CGCTACTATT TGCGTCAGCC GTCCTATTAT
GTGGTTGGCA TGTTGTTGTT TCTGGTGTGC TTTTTTGCTA CAGCAACCGA TAACGTCCAA
ATCGGCAGTG GCGGTGAAGT CCTCAAAAAC AGCCCATTCG CCATCGGCCA GACCCTGCTC
ATCACCGGGG TGATCGCCAT GTTTGCCGTG GTGAATTTCG TTGGCAGCAC AGCGGTACGT
AACCAGCAAT GCCTGATGGA AGAGCTGCTT TATGTGAAGC CGCTGTCGCC AATAGGCTAT
CAGCTCGGCC GCTTTGCGGG CAGTGCGTTG GTCGTCATGA CCCTGTTCAC CCTTGCGCCC
CTTGGACACC TGCTGGGGTC TTTGATGCCC TGGGTGGATT CCAGTCGCTT TGGGGAAATC
TCCCTGTGGT TTTACCTTAA GCCCATGTTG CTGCTGGTGA TGCCAAGTCT GCTGTTTTTG
TCGGCGCTCT TCTATGCCAT GGCACAGAAG TTCCGCTCCA TGATGGCTCT GTATCTGACT
GCGGTGGCGG TGTTTATTCT CTACGGATTG GCAGGGCAAC TGGCAAGCCA GCCACAGTAC
CGTGAGATTG CGGCCCTACT CGATCCTTTC GCGCTTCGCA CCTACAGCCA GGTGGCGCGC
TACTGGACCA TTGCCGAGAA AAACACCATC AGCATGGGGC TTGAGGGCCT GATGCTGCAA
AACCGGGTTA TCTGGCTCAG CATTACCGCT TTTATTCTGG CTATCAGTGG TTTGCATCGT
CAACCATCTT TAACCCGTCG CACAGAAGGG AAAAAGCAGC GTGCCTACAA GGTACCAGTC
ATGCCGCCAT TGTCGGCGCT GGTGCGCACA CCCAATATCA GTGGCCGTGC CCAGTTCTGG
ACCCGGGTGC GCTTTGAGGT GAAGCAGGTG CTGTTTACTG CGCCTTTCTA CATTCTCGGC
GCCCTGAGTA TCTTTAACCT GCTGGGGCCC ATGATTGCCG GGGACCTGAA CTGGTATGGC
ACCAGCAATT GGCCGCTGAC CCAGGATATG GTTGACCTGA TTGTGGGTTC CACCGGCCTT
TTGATGGTCA TCATCCTGGT GTTTTACTGC GGTGAAATCG TCTGGCGTGA GCGCAGCACA
GGTATGGGTG ACATCATCGA CAGCCTGCCG GTATCCAATC GTGTGTTCCT GAGCTCCAAG
TTTGTGGCTC TGTCGCTGGT GATGGTGATT CTGTATCTGA TTGCCATGCT GACCACTATT
TGCTTTCAGC TCATCAAGGG GCAGATGAAC CTCGAGCTGT CGCAATACGC CATCCGTTTG
GGCTTTATGA TTTTGCTGCC CTTGATGATG TCGGCGGTTC TGGCATTTTT CTTCCAGGTG
TTGGCCCCCA ATAAGTATGC CGGTATGGGT CTGTACGTGG GCTATTACGT CCTGAGCCTT
ATTCTGGCCA GTTGGGGTTT TGGCCACAGC CTGAATAACT TTGCCAGCTC ACCGACCTTG
CCATACTCCG ACATGAACGG TTACGGCTGG TCGTTGCAAA GCCATGCCCT GTATATGCTG
TACTGGGGCG CTTTCTCTGT GCTGCTGTTC CTGCTCGCGT TCGGCTTATA TCGCCGTGGC
CCTGAAGTGG GGCTAAAACA CCGTATTGGT CTGCTGAAAT ATCAGCTTGG CAGTGGCGGT
CGCGTGCTGG CCTTCGCCTC GGTGGCGGTA TTTGCGGGGA TGGGCGCTTA TCTCTTTTAC
CAAACCACTG TGGTCAATGA CTATCGTATT CCCGATGAGA TGACCGACAG TCAGGCCGAT
TACGAAAAGC GCTATCGCCA GTATGCCGAT GCGCCTGTGT TGTCACCTGT GAGCGTAAAA
GGGCACTTCG ATATCTACCC CGGCGAGCGC CGTCTGAAGG CCCGTGTCGA GATGCGTTGG
CAAAACCGCA GCGGCGAGCC TATCAGCCGC ATGTTGGTGA GCCTGCCAGA GCATACCGAC
AGAGCATCAT TGAAGTTTGA TATTCCCGGT GCCCGTTTGG CCGATGAGGA CGATTCGCTG
CCGGTAGCCT GGTTGGTATT TGATACGCCC ATAGCCGTTG GCGCCGAGAT AGCGGGTGAG
ATAAGCCTGG TGCGGGAAAA CACGGGGATT GCCGAAAACA ATTTTGATCT CACGCTGGTA
GAAAACGGCA CCTTTATCAA TAACTTTGAA TTGTTGCCTG TCTTTGGCTA CCAGAGCGAT
GCCGAGCTGC TCGACAGACA CGAGCGCGAA AAGCGAGGTC TGCCACCCAA GGACAGAGCC
AATAAACTCG AAGATAAACG TTTCCATCAG GTCAACTTCT TCGGTCCCCA GGGCAGCTTT
GTCGACTTTG AAGCCACAGT GTCTACCGCG GGCGATCAAA CGGCGTTGGT ACCGGGATAC
CTGACCAAAG CCTGGCAGGA AAATGGCCGT AACTTTTTCC ATTACAAAAT GGACAGCCCC
ATGGTGAACT TCTTCGCCAT CGTATCTGGC CGTTTTGAGG TGAAAAAGGA GCAGTACAAG
GGGATTAATA TCGAGGTGTA TTATCACCCC GACCATCCCT GGAACGTGGA GCGCATGGTG
GAGTCGGTGC GTGATTCCAT CGACTATTTC ACTCAGGCCT TTGGTCCCTA TCAGCATCGT
CAGCTGCGGA TTATGGAGTT CCCGGGATAC CGCTCATTTG CCCAGAGTTT TGCCAACACT
GTGCCTTACT CTGAGCGGAT AGGCTTTATT ACCGATTTAA GAGATCCCGA CAAGATTGAC
CCCGTGTACT ACGTGACCGC CCACGAGGTC GCCCACCAGT GGTGGGGCCA TCAGGTCGGT
GCCGCCGATG TGCAGGGCAG TGCGGTAATT TCTGAGAGCC TGTCGCAGTA TGCCGCTCTG
ATGGTGATGG AAAAAAAATA CGGCGCCCAT ATGCTCAGGA AATTCCTGCG TTATGAGCTT
GACCGTTATT TGCGTGGCCG TGGTGGTGAG CGTATTGGTG AAATGCCGCT GCTGCGCAGT
GAAAATCAGC AGTACATCCA TTACCAGAAA GGATCTGTAG TGATGATGGC CATTAAGGAC
ATGGTGGGTG AAGAGAAGCT CAATGCCAAT CTTGCCGCCT TCCTTGAGCG TTATCGTTAT
CGGACCGATC CCTTCCCAAC CACCCTGGAT TTGCTCGATT ACCTTAAACA AGGGCTTGAT
GATGAAGAGC TGGCCTTTGT GGACAGTGCC TTCAGAGACA TCAAGCTCTA TGATTTGCGC
CTGACCAATG CCAAGGTTAC CGAGCTTGAA AACGGTAAGG TGCGGGTGGA TTTGGATATC
CACGCCGGGC TGCTCAAGGC TGATAATGAA GGCAAGGAGC AGGAAGAGAT CTTCAATGAG
CGGGTGGATA TAGGGCTATT TGCTGCTGAC CCCGACAGTA TAGATTCTGA AGAGCAAGTG
CTTTTACTGG AGAAACATCC TCTTAAATCC GGCGACAATC AGTTGTCCTT TGAGTTGGAT
AAAGCCCCAA GCTTTGTCGG CGTTGACCCC TTCGTGAAGC TGGTTGACAG AGACAGTAAA
GACAACATCT TTAAGCTCTA A
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| Protein sequence | MFLHTLSFEW RYYLRQPSYY VVGMLLFLVC FFATATDNVQ IGSGGEVLKN SPFAIGQTLL
ITGVIAMFAV VNFVGSTAVR NQQCLMEELL YVKPLSPIGY QLGRFAGSAL VVMTLFTLAP
LGHLLGSLMP WVDSSRFGEI SLWFYLKPML LLVMPSLLFL SALFYAMAQK FRSMMALYLT
AVAVFILYGL AGQLASQPQY REIAALLDPF ALRTYSQVAR YWTIAEKNTI SMGLEGLMLQ
NRVIWLSITA FILAISGLHR QPSLTRRTEG KKQRAYKVPV MPPLSALVRT PNISGRAQFW
TRVRFEVKQV LFTAPFYILG ALSIFNLLGP MIAGDLNWYG TSNWPLTQDM VDLIVGSTGL
LMVIILVFYC GEIVWRERST GMGDIIDSLP VSNRVFLSSK FVALSLVMVI LYLIAMLTTI
CFQLIKGQMN LELSQYAIRL GFMILLPLMM SAVLAFFFQV LAPNKYAGMG LYVGYYVLSL
ILASWGFGHS LNNFASSPTL PYSDMNGYGW SLQSHALYML YWGAFSVLLF LLAFGLYRRG
PEVGLKHRIG LLKYQLGSGG RVLAFASVAV FAGMGAYLFY QTTVVNDYRI PDEMTDSQAD
YEKRYRQYAD APVLSPVSVK GHFDIYPGER RLKARVEMRW QNRSGEPISR MLVSLPEHTD
RASLKFDIPG ARLADEDDSL PVAWLVFDTP IAVGAEIAGE ISLVRENTGI AENNFDLTLV
ENGTFINNFE LLPVFGYQSD AELLDRHERE KRGLPPKDRA NKLEDKRFHQ VNFFGPQGSF
VDFEATVSTA GDQTALVPGY LTKAWQENGR NFFHYKMDSP MVNFFAIVSG RFEVKKEQYK
GINIEVYYHP DHPWNVERMV ESVRDSIDYF TQAFGPYQHR QLRIMEFPGY RSFAQSFANT
VPYSERIGFI TDLRDPDKID PVYYVTAHEV AHQWWGHQVG AADVQGSAVI SESLSQYAAL
MVMEKKYGAH MLRKFLRYEL DRYLRGRGGE RIGEMPLLRS ENQQYIHYQK GSVVMMAIKD
MVGEEKLNAN LAAFLERYRY RTDPFPTTLD LLDYLKQGLD DEELAFVDSA FRDIKLYDLR
LTNAKVTELE NGKVRVDLDI HAGLLKADNE GKEQEEIFNE RVDIGLFAAD PDSIDSEEQV
LLLEKHPLKS GDNQLSFELD KAPSFVGVDP FVKLVDRDSK DNIFKL
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