Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1181 |
Symbol | |
ID | 4603433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1443797 |
End bp | 1445113 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639780528 |
Product | hypothetical protein |
Protein accession | YP_927058 |
Protein GI | 119774318 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCAC CTGCTTTGTC CCGTGCGCCG TTGCCGCAAA ACGCCCCGTC ATCGGGCGCC GAGCATGAAC TTCAGCTGCC GCAAGTCATG TCGACACTTG CCGCGCTGGC TTGTGTATTG CAGCAAGGGG CAGCGCTTTG GGATTTTCGG CCTTTTGACC GCCAGGATAA CCCTTGGCGG CTAAGCTTTC CCAATCTCTG GCAAGCAATT GAGACGCTTA ATGATGATTG CCTTGACGCG TTGGATCTGG TGCAGGCGGA ACTCTGTCAT AGCCTTTGGC CAGCGCTGTG CCAAGACCTA AAGGTAAACG GACTCAAGGT GTGGGATCAG TCGCTTTTTT TATGGCAATT ACCGCACCAC TCGCAGGCAA GTCAAACCCT GGAGGCGCTG CCGGAACATG ATCTCAGCCG TTTTTCCGCC GGGATCAAAG GCCGCAAATG GCAACAGATA AGCCGCTTTG CCAATATCGT CAGCCTGCCA CCTGCCCCGT ATCCCTATCT GGAGTGGTGC GCCGGTAAAG GCCATCTTGG GAGACTCGTT GGGGCGGTAA GCCACAAGCC TGTGCTGAGC CTCGAGTGGC AGCAACAGCT GTGCATTGAC GGAGAAAAGG AGGCGCAAAA GCGGGGTGTC AACCAACGCT TTGTCTGTGC CGATGCCTTT TCAGACGAGG CAGAGTTACT CCAGCGTGAG CAGCATGCAC TTGCGCTCCA CGCCTGCGGT GAGCTGCATC TGGTGCTGCT AAGGCGCGCC GCCGCAGCCC AAACCCGCGC CATCAGCCTG TCGCCCTGTT GTTACCACCT TATTCAAGGG GAGCAATACG TGGGGCTCAG CGCCAGCGCC AGAGCCACAG GACTGGTGCT CGATAAGCAT GGCCTGCAGC TCCCCCTCAA TCACTCGGTC GTTGCCAGTG CAAAAGAAAA GCAGGACCGC CTGAAGGAAG TTCAGTGGCG CCTGGGGTTC GACTGCCTGC AGCGCCATTT GCGCCGGGAT GACAGCTACT TACCCTTACC CTCGGTGCGC CAAAGCCAGC TCTCCGGCAG TTTTGATGCC TTTTGCCGCT GGGCCTGTGA GCTTAAAGGC CTGGTGTTGC CCGCGGATTT TTATGCTGAT GAATGGTTGG CCAAAGGATG CCAGCGCCAG CGACTAACCC GGCGATTGGA TCTGGTGGCG CACCTCTTCA GGCCTGTGAT TGAACAGTAT CTGCTACTGG ACAGGGCCGC ATTTTTGTTG GAATCGGGCT ACCGTGTGAG CCTCAGTGCG TTCTGTCCCC CTGGGATGAC GCCCCGTAAC GCCCTGATTG ACGCCCGTCG TGATTGA
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Protein sequence | MSAPALSRAP LPQNAPSSGA EHELQLPQVM STLAALACVL QQGAALWDFR PFDRQDNPWR LSFPNLWQAI ETLNDDCLDA LDLVQAELCH SLWPALCQDL KVNGLKVWDQ SLFLWQLPHH SQASQTLEAL PEHDLSRFSA GIKGRKWQQI SRFANIVSLP PAPYPYLEWC AGKGHLGRLV GAVSHKPVLS LEWQQQLCID GEKEAQKRGV NQRFVCADAF SDEAELLQRE QHALALHACG ELHLVLLRRA AAAQTRAISL SPCCYHLIQG EQYVGLSASA RATGLVLDKH GLQLPLNHSV VASAKEKQDR LKEVQWRLGF DCLQRHLRRD DSYLPLPSVR QSQLSGSFDA FCRWACELKG LVLPADFYAD EWLAKGCQRQ RLTRRLDLVA HLFRPVIEQY LLLDRAAFLL ESGYRVSLSA FCPPGMTPRN ALIDARRD
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