| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1115 |
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| Symbol | |
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| ID | 4603367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1359215 |
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| End bp | 1366843 |
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| Gene Length | 7629 bp |
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| Protein Length | 2542 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639780462 |
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| Product | erythronolide synthase |
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| Protein accession | YP_926992 |
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| Protein GI | 119774252 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00517] acyl carrier protein
[TIGR02813] polyketide-type polyunsaturated fatty acid synthase PfaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGT CCAAGACTCA GGACGCGCAG GATCTGCGCC TTAACAAGCG TCTCAAGGAC
ACCCCCATTG CCATCGTCGG CATGGCGAGT CTCTTTGCCA ACAGCCGTTA TCTGAACGAC
TTTTGGGATC TTATCTGCGA CAAAATCGAC GCCATTACAG AGGTTCCCGC CGATCGCTGG
CAGATTGATG ACTACTTTGA CGCCGATAAA CGCTCACCGG ACAAGAGCTA CTGTAAACGC
GGCGGCTTTA TCCCACAGGT CGACTTCAAC CCCATGGAGT TTGGCCTGCC GCCCAATATT
CTGGAGCTCA CCGACAGCGC CCAGCTGCTG TCACTCATCG TGGCAAAAGA AGTACTGGAA
GACGCGGGCG TCAGCGAAAA CTCGGCCCAC GACCGCGATA AAATCGGTAT CACCTTAGGC
ATTGGTGGCG GCCAAAAAAT CAGCCAGAGC CTCAATGCCC GCCTGCAATA TCCTGTGCTG
AAAAAAGTCT TTCGCGAGAG TGGCATCAGC GATGCCGACA GCGAGATGCT CATTCGCAAA
TTTCAGGATC AATACATCCA CTGGGAAGAG AACTCCTTCC CGGGAAGCCT GGGTAACGTG
ATTGCCGGAC GCATCGCCAA CCGTTTTGAC CTGGGTGGTA TGAACTGCGT GGTCGACGCC
GCCTGCGCCG GTTCCCTCGC GGCTATCCGC ATGGCCCTTA CCGAGCTCAC CGAAGGTCGC
GCCGACATGA TGCTCACCGG CGGCGCCTGT ACTGATAACT CCGCCTACAT GTACATGAGC
TTCTCCAAGA CCCCGGCCTT CACCGTGGAC GAGCAAATCA AGCCCTTCGA TGCCGACTCC
AAAGGCATGA TGATTGGCGA AGGTATTGGC ATGGTGGCCT TAAAGCGCCT CGAGGATGCC
GAGCGCGACG GCGATAAAAT TTACGCCGTC ATCAAAGGGG TTGGCGCCTC CAGCGACGGC
AAGTTCAAGA GTATTTATGC CCCGCGTCCC GAAGGTCAGG CCAAGGCCCT GCGCCGCGCG
TACGATGATG CCGGATTCCC TGCCCATACT TTGGGTCTGA TGGAAGCTCA CGGCACAGGC
ACGGCCGCAG GGGATGTGGC CGAGTTTTCC GGCCTCAGTC TGGTGATGGG CGAAAGCAGC
GATGAAACCC AGCACATTGC CCTGGGGTCC ATCAAGTCCC AGGTGGGTCA CACCAAGTCA
ACGGCGGGTA CCGCCGGGCT TATCAAGGCC GCTCTGGCGC TGCATCACAA GGTGTTACCG
CCCACCATCA ATGTGAACAA ACCCAATCCC AAGCTCAATA TCGAAGCCTC GCCCTTTTAT
CTGTCCACCG AGACGCGCCC CTGGCTGCCG CGTCCCGATG GCACGCCGCG CCGCGCCGCA
GTAAGCTCCT TTGGCTTTGG CGGCACCAAC TTCCATCTGG TGATGGAAGA GTATCAGCGC
GACCATGGCC GCACGCCCTA TCGCCTGCGT TCCACCCAGG TACCACTGCT ATTTGCCGCG
CCCAGTCGCG AGGCGCTCTC CAATGATCTC AAGGCCCTTT GTGAGCGTCT TTCAAACACC
GAAGAAACCT TCGAAACCCT GACAGCGCCT TTCACTCTCA AGGGCGAACC TCCCAAGGCC
GAATGGCCAC GACTGGGAAT AGTGGCCGCC AATGCAAAGG CCCTCAAAGC CTGTTTGGAA
GATGCCATCG AAAAACTTGC CACCTCATCA GATGACTGGC ACACCCAAGA CATGAGTTTC
CGCGCCCAGG CCATGGCGAA AAATACCAGG GTGGCCGCTC TTTTTGCCGG TCAGGGCAGC
CAATATCTCG GGATGGGCGG CGAGCTTGCC ATGCTCTACC CCGAGATGCG CGCCGAATTT
ATTGCCGCCG ACGAGGTTTT CCACCAGCGC GGATACCCAG GCCGTCATGG CACTGGCGAG
CTTTCAAGCC ACGTGTTCCC CATTCCCAAG TTCGATAGCG ATGCCCGCAA GCAAGACGAA
GAGGCGCTCA CCAACACCCG TATCGCCCAA AGCGCTATTG GCGTGGTCAG CATGGGGCAA
TTTGAAATTC TCAAGGCCGC CGGTTTAACC CCGGATGCGG TGGCAGGCCA CAGCTTTGGC
GAGCTCTCGG CGCTGCGCGC TGCCGGTGTG ATTGACCAGG CCAGCTACTA TCGCCTGGCC
TTTGCCCGCG GCGATGCCAT GGCATCCGTA CCAAAAGGCA AGGACGCGGG CACCATGGCC
GCCGTGATAC TGCCGGACGC CAGCCACAGA AGCACTCTGG ACACCTTACT TACCCAGCAC
GAATCCGTGG TGATTGCCAA TCATAACAGC CCCACCCAGC TGGTGTTGGC AGGCCCCACA
GACGCGGTTA AGCAGCTGGT GCAAGCCCTT GCCGACAAGG GCATTCGCGC CATCGCGCTG
CCGGTGTCGG GCGCCTTCCA TACGCCCTTG GTTGGCCATG CCCATGCACC TTTTGCCAAG
GCCATCGACA AGGAATCCTT CAGCGATGCC CATGCTGTGC TTTATGCCAA TGCCTCCGGC
GACAAACGTC CCACTGATGG CAAAAGCCTC AAGCAGAGCC TGAAGGCCCA GATGCTGGAG
CAGGTGCAGT TTGAGTCGCA AATCGAAAGC CTCTACCGCG ATGGTGTACG GGTATTTATC
GAATTTGGTC CCAAGAACAC CTTAAGCCGT TTGGTGGATG CCATCCTCGG CGAGCGGGCC
AAAGCGTGCC TTATTCTGTC GCTGGATGCC CAGGCGGTGG GCAGTCAGGG CCGCGCCGAC
AGCAAGCTCA AGCTGGCCGC AGTTGAATTG GCCACCGCAG GATTTGCCAT CACCAACCCG
GATCCGTACC GCGAGCAGCT GTCCCACAAG GCGATGCCCA AATCACCGCT TACGGTCAAG
CTCAGCGCCA GCAACTACCT GAGTCCGGCC ACTGCCGCGC GCATGCAGGC CTCCCTCAAG
GACGGCCAGA TAAGCAAACA AACCCAGATT GTCGAGAAAA TCGTGGAAAA GACCCAATAC
GTTCCAAAGG CAGCCCCCGC CCAGCCAGCA CCCGCAGTCC AGACCACCGC GGCGAGTGAA
CAAACAAGCC CGGCGCCGAC AGCAGGCGCT GGAACAAACG TCGGCACAGG TACGCTGGAA
GCACTGTTTG CCGCCCAGCA GCAACTGGCG GCCCTGCATC AGCAGTTTCT GACAATTCCT
GCCCAATACG GTGAAGGGGT GCAGGCGCTG ATGCAAAAGC AGCTGGAGCT CGCCAGTGCC
GGTCTGCCAG TCCCTGCCGC CACTGAGCGC GCGCTGGAGC TTTTCCACCA GCATCAGGCC
GATACCCTGA AAATCCACAG CGACTTTATG CGCGCCCAGG TCCTTGGCAG TGAACAAATG
CTGAGCGCCC TCTCGGGTCA AACGCTGGTG AGTCAGGCGC CTCAAACGGC CGCCGCGGTT
GTGGCTGCCC CTGTGGCAGC TGCGTCTCAG GTCATGGCCG CCCCAGTGGT TAAGGCCCCT
GAAGCGCCTG TGACGGCTCC TGTTGCTGCA CAGGTTGCAG CCCCCATGCC CGCACCGGCC
ATGGTAATCC CGGCCGCCGC CTCTGTGGCT GCATTGCCAA TCCAGGACAT CATGCTGCAG
GTTGTAGCCG CCAAGACAGG CTACCCTACC GAGATGCTGG ACCTGTCCAT GGACATGGAG
GCAGACCTCG GTATCGACTC CATCAAGCGG GTGGAAATCC TCGGCACAGT GCAGGATGAA
CTGCCCACGC TGCCTGAGCT GGATGCCGCC ACCCTGGCCG AGTGCCGTAC CCTGGAAGAC
ATTGTTGCTT ACATGCATAA GGTCGCAGGC ACAAGCCCGG TAACTGCCGC CACATCCCAC
TCTCAGGCCG TGCCCACGCC GGTATCAGCC TCGGCCGATA TCACCGCCGT GATGCTGAAA
GTGGTGGCCG ACAAAACCGG CTATCCCACT GAAATGCTGG ATTTGGCTAT GGACATGGAA
GCAGATCTGG GTATCGACTC CATCAAGCGG GTGGAAATCC TCGGCACAGT GCAGGATGAA
CTGCCCATGC TGCCTGAGCT TGACGCCGCG ACGCTGGCCG AATGCCGTAC CCTCGAAGAC
ATAGTCGCTT ACATGCACAG CATGACAGGC GCTGCGGTCT CTCAGGCACC TGTATCTCAA
ACGGCTGCGC CAGCTTCTCA TCAGGCTGCC CATAGCAGCA GCGATATCAC TCCCGTGATG
CTGAAGGTGG TGGCCGACAA AACCGGCTAT CCCGCCGAGA TGCTGGATTT GGCCATGGAT
ATGGAAGCAG ATCTGGGTAT CGACTCCATC AAGCGGGTGG AAATCCTCGG CACAGTGCAG
GATGAACTGC CCACGCTGCC TGAGCTGGAC GCCGCGACGC TGGCCGAGTG CCGTACCCTC
GCCGACATAG TCGCCTACAT GCACAGCATG ACAGGCGCTG CTGTATCTCA AGCTGCTGTA
TCTCAGGTGG CCGCTCAAGG GGCAACCCAG TCCACACAAA ACAGCAGCGA TATCACCGCT
GTAATGCTGA ACGTCGTGGC CGACAAGACG GGTTACCCCG CCGAGATGCT GGAACTTGCC
ATGGACATGG AAGCAGACCT CGGTATTGAC TCCATCAAAC GAGTGGAAAT CCTCGGCACA
GTGCAGGATG CGCTGCCAGG CCTGCCGGAA ATTGACCCCA GCACCCTGGC CGAATGCCGC
ACCCTGGGCG ACATCATCGC CTGCTATGGT ACGGACGGCG CGCAGGACGC CACAGACAAC
GGCAAAGCCG AAGCCCAACA AACAGAGGCT GACGCGGATA CGGGCATCGA GGTGGAAGTG
GATATCGCCG TCTCTGCACT GGCGGCAGCC CAGGACATAG TTGCCTCTGA ATCTGCCACC
GCATCTGCCT TCGAGTCCGA TAACGCAACT GCTGCGGCCG CTGCGGCAAC GCTGCCAACC
CCAACGCCAC AACAAGTGCT GGACACCATG CTCACCGTGG TGGCCGAGAA AACCGGTTAT
CCGGTGGAGA TGCTGGACCT GGCCATGGAC ATGGAAGCAG ACCTCGGTAT CGACTCCATC
AAACGGGTAG AGATTTTAGG CACGGTGCAG GAGCGCCTGC CGGGTCTGGC CGAAGTGGAT
GCCGCCACCC TCGCCGAATG CCGCACCCTG GGGCAAATCG TCGAAAGCTT CTCCCTGCCA
AACCAATATG TGGGCACAGA TGCCAGCACC GACACCGAGC TTGCCCCGCA CACGGGGGTT
GCCCTAAAAA AGCTGCAGGC GGCAGATAGA CTCGAGGCCC CATCGGCCAC CGGGCTGTTT
GCCGCCAAGG GTCGTGTCAT CATCCTCGAT GACGGCCACA ATGCCGGTGT ACTGGCAGGT
CGTTTGGATG CCAAAGGCCA TGCGGTCACC GTCATTCGCT GCGACAGCCT GGGCCATCAG
TCGGTATTGG ATGCCAGCAT AGATGCCCGC ACACTTTCTC AGGGCGGCGA CATGGACACC
GAAATCCAGT CGCTGATCAA AGCGCTTGAG CCCGTGTCGG CCTTTATTCA TCTGCAACCT
GTCATGGCCG CAGATGACGG CGCCGCAGAC GTTAAGGCGA CTGCCCGTTT CAGTGATGAG
GCTTTTTCTC AGGTATCCCT GGCGTTTTTG TTCGCCAAGC ACCTGGCTGC GGATTTTGCC
GCAGAAGGCG CCCACAGACG CGCCTTTATC ACAGCGGCGC GCATGGACGG CAAACTGGGG
CTCTCCGGCG CCGATGTGGA GCTGAATCAG GCCGCCCTCT TTGGCCTCAC CAAAACCCTG
GCCCAGGAAT GGCCCCATAC GCACTGCCGG GCACTGGATG TGGCGGCCCA GTTGGATGCC
ACCTCGCTGG CCGATGCCGT GATTGACGCC CTCTATGGTG CTGATGACTT GCTTGAATGG
GGTATAGCTG CCGATGGCCG CTTTGCTGCT TTGGCAACCG ATGCGCAGCA AATTTCAGCA
AAAACAGCGT TAAACAGCAC AGATAAAATA CTGGTGACCG GGGGTGCAAA AGGGGTAACC
CTCGACTGCG CCCTGGCATT GGCAGCGCGC ACCCACGCCC ACTTTATTCT GGCGGGGCGC
AGCAAGGCGC TGAGCCTCAA TGAGTTCCCG GTTTGGGCCA AAGGGGTTGC GGCGACAGAG
CTTAAACAAG CGGCCATTCA GGAGCTGCTG GCAGGTGGCA AACGCCCCAC GCCCAAGGAA
GTGGACGCCC TGATTGCCCC CCTTGCCAGC GCCCTGGAAA TTCAGCAGGC ACTGCAGGCC
TTCAGCGACC TGGGTGCCAG CGCCGAGTAC CTGTCCATGG ACGTATCATC GGCCGAGTCC
ATCGCCAAAG CGTTGGGGCC CATACAGGCC ATTGCCCCTG TCACAGGCCT CATTCACGGC
GCCGGTGTGC TCGCCGATAA ATTCATTCAG GACAAGACCC TCGATGAACT CAAGCGGGTG
GCAGGCACCA AGGTTGATGG TCTCAAAGGC CTGTTGGCAA ACCTTGACGG GCTGAAACTG
GTGGCGCTCT TTTCCTCTGC GGCCGGTTTT TATGGCAACA AGGGGCAGAG TGACTACGCC
ATGGCCAATG AAATTCTCAA CAAGGCTGCC CACCGTTTGG CCCATGCCAA ACCGGATTGC
CGCGTGGTGG CCTTCGATTG GGGCCCATGG GATGGCGGCA TGGTCACCGA CAGCCTGAAA
AAAATGTTCC AGGAGCGCGG CGTGTACGTT ATCCCCCGCC CCCTGGGTGC AGCCCTCTTT
GCCGAAGCCG TGCTTGGCCG CGCTGAGTCC CAGATTTTGG TGGGCTCCAG CATGCAGGGC
AATGCAGACC AGGCTGGCGC AAACCTAAAA AAGCCTGAGG GGCACAGCGG AATTACCCTC
GGTCGCACCC TTTACCGTCC ACATCTGGCG CTCCTTGAGG ATCATCAGAT TGGCGGTAAC
GCTGTGCTGC CTACCGTCTG TGCCCTGGAA TGGATGCAAG ATGCGGCCAC CCGTCACTTT
GGCGGGCAGT GGCAACCCCA TGACTATCGT CTGCTCAAGG GCGTGGTGTT CGACAGCGAT
GAAAAAGCCC TGACCATGCA GCTTAACGTC ACGGACGCCG GCTTGTCGGC GCTTATCAGC
TGCGACGGCC GCCCCCAATA CGAGGCACGG TTGCAACCAC CAAGCCCACT CTCACTGCCA
TCCGAGGCCA TGGCAGCAGA TATCCGGCAG TCGGCGGACA AGGCGGTAGT CACAGGCAAG
CAGCTCTATC AGGATGGCGC GCTGTTTCAT GGGCCTGCGC TGCAGATGAT TGGTGACGTG
AGCTGGTTTG ATGATGGCGG GCTGGGCTGC ACTGTGATGC TGCCTGCTGC CAGTGTCGAA
CCGGGACAGG CAGCGATTAT CCAGCAGGAC GCCCTGCTGC AGGCGCTCCT GGTGTGGGCG
CGACTCAAAT ACGATGCCGC CAGCCTGCCA GCAAGCCTTA CGCGCGCGGT GCAACACCTT
GAGCTTAGCC CCGGTGAACA GGGCCAACTT CGCCTGTGGG TGAAGAGCCA CTCATCGCGC
CAGCTCTGCG CCGATGTCGC CCTTTATAAT GCGCAGGGGC AGCTCGCCTC GGCGATGGAA
GGGGTAAAGG TCACTATCAG CAAAAGCCTG AATCAGGCTT TTTTGTCGGC CAAGGGCCAG
GAGATATGA
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| Protein sequence | MSESKTQDAQ DLRLNKRLKD TPIAIVGMAS LFANSRYLND FWDLICDKID AITEVPADRW
QIDDYFDADK RSPDKSYCKR GGFIPQVDFN PMEFGLPPNI LELTDSAQLL SLIVAKEVLE
DAGVSENSAH DRDKIGITLG IGGGQKISQS LNARLQYPVL KKVFRESGIS DADSEMLIRK
FQDQYIHWEE NSFPGSLGNV IAGRIANRFD LGGMNCVVDA ACAGSLAAIR MALTELTEGR
ADMMLTGGAC TDNSAYMYMS FSKTPAFTVD EQIKPFDADS KGMMIGEGIG MVALKRLEDA
ERDGDKIYAV IKGVGASSDG KFKSIYAPRP EGQAKALRRA YDDAGFPAHT LGLMEAHGTG
TAAGDVAEFS GLSLVMGESS DETQHIALGS IKSQVGHTKS TAGTAGLIKA ALALHHKVLP
PTINVNKPNP KLNIEASPFY LSTETRPWLP RPDGTPRRAA VSSFGFGGTN FHLVMEEYQR
DHGRTPYRLR STQVPLLFAA PSREALSNDL KALCERLSNT EETFETLTAP FTLKGEPPKA
EWPRLGIVAA NAKALKACLE DAIEKLATSS DDWHTQDMSF RAQAMAKNTR VAALFAGQGS
QYLGMGGELA MLYPEMRAEF IAADEVFHQR GYPGRHGTGE LSSHVFPIPK FDSDARKQDE
EALTNTRIAQ SAIGVVSMGQ FEILKAAGLT PDAVAGHSFG ELSALRAAGV IDQASYYRLA
FARGDAMASV PKGKDAGTMA AVILPDASHR STLDTLLTQH ESVVIANHNS PTQLVLAGPT
DAVKQLVQAL ADKGIRAIAL PVSGAFHTPL VGHAHAPFAK AIDKESFSDA HAVLYANASG
DKRPTDGKSL KQSLKAQMLE QVQFESQIES LYRDGVRVFI EFGPKNTLSR LVDAILGERA
KACLILSLDA QAVGSQGRAD SKLKLAAVEL ATAGFAITNP DPYREQLSHK AMPKSPLTVK
LSASNYLSPA TAARMQASLK DGQISKQTQI VEKIVEKTQY VPKAAPAQPA PAVQTTAASE
QTSPAPTAGA GTNVGTGTLE ALFAAQQQLA ALHQQFLTIP AQYGEGVQAL MQKQLELASA
GLPVPAATER ALELFHQHQA DTLKIHSDFM RAQVLGSEQM LSALSGQTLV SQAPQTAAAV
VAAPVAAASQ VMAAPVVKAP EAPVTAPVAA QVAAPMPAPA MVIPAAASVA ALPIQDIMLQ
VVAAKTGYPT EMLDLSMDME ADLGIDSIKR VEILGTVQDE LPTLPELDAA TLAECRTLED
IVAYMHKVAG TSPVTAATSH SQAVPTPVSA SADITAVMLK VVADKTGYPT EMLDLAMDME
ADLGIDSIKR VEILGTVQDE LPMLPELDAA TLAECRTLED IVAYMHSMTG AAVSQAPVSQ
TAAPASHQAA HSSSDITPVM LKVVADKTGY PAEMLDLAMD MEADLGIDSI KRVEILGTVQ
DELPTLPELD AATLAECRTL ADIVAYMHSM TGAAVSQAAV SQVAAQGATQ STQNSSDITA
VMLNVVADKT GYPAEMLELA MDMEADLGID SIKRVEILGT VQDALPGLPE IDPSTLAECR
TLGDIIACYG TDGAQDATDN GKAEAQQTEA DADTGIEVEV DIAVSALAAA QDIVASESAT
ASAFESDNAT AAAAAATLPT PTPQQVLDTM LTVVAEKTGY PVEMLDLAMD MEADLGIDSI
KRVEILGTVQ ERLPGLAEVD AATLAECRTL GQIVESFSLP NQYVGTDAST DTELAPHTGV
ALKKLQAADR LEAPSATGLF AAKGRVIILD DGHNAGVLAG RLDAKGHAVT VIRCDSLGHQ
SVLDASIDAR TLSQGGDMDT EIQSLIKALE PVSAFIHLQP VMAADDGAAD VKATARFSDE
AFSQVSLAFL FAKHLAADFA AEGAHRRAFI TAARMDGKLG LSGADVELNQ AALFGLTKTL
AQEWPHTHCR ALDVAAQLDA TSLADAVIDA LYGADDLLEW GIAADGRFAA LATDAQQISA
KTALNSTDKI LVTGGAKGVT LDCALALAAR THAHFILAGR SKALSLNEFP VWAKGVAATE
LKQAAIQELL AGGKRPTPKE VDALIAPLAS ALEIQQALQA FSDLGASAEY LSMDVSSAES
IAKALGPIQA IAPVTGLIHG AGVLADKFIQ DKTLDELKRV AGTKVDGLKG LLANLDGLKL
VALFSSAAGF YGNKGQSDYA MANEILNKAA HRLAHAKPDC RVVAFDWGPW DGGMVTDSLK
KMFQERGVYV IPRPLGAALF AEAVLGRAES QILVGSSMQG NADQAGANLK KPEGHSGITL
GRTLYRPHLA LLEDHQIGGN AVLPTVCALE WMQDAATRHF GGQWQPHDYR LLKGVVFDSD
EKALTMQLNV TDAGLSALIS CDGRPQYEAR LQPPSPLSLP SEAMAADIRQ SADKAVVTGK
QLYQDGALFH GPALQMIGDV SWFDDGGLGC TVMLPAASVE PGQAAIIQQD ALLQALLVWA
RLKYDAASLP ASLTRAVQHL ELSPGEQGQL RLWVKSHSSR QLCADVALYN AQGQLASAME
GVKVTISKSL NQAFLSAKGQ EI
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