Gene Sama_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1106 
Symbol 
ID4603358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1341377 
End bp1341832 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content59% 
IMG OID639780453 
Producthistone acetyltransferase HPA2 
Protein accessionYP_926983 
Protein GI119774243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA AGCTTGACGA TTTAAGCCAC CCGGCGGTTG CCAGATTACT GCACGAACAT 
CTGGAAGACA TGTACGACAA CTCCCCCGCA GACAGCGTGC ACGCGCTTGA CCTGGCCCGT
CTCAAGCAAC GTGATATCCG TTTTTATACC CTGTGGCAGG GCAATACCCT CGCCGCCTGC
GGCGCCGTGA AGCAGGTGGA CTTTCACAGC GGCGAAATCA AATCCATGCG GGCCACCCGC
GCGCTGCGCG GTCGCGGTTT TGGCCATGCC ATGCTGATGC ATCTGGAAAA CGAAAGTCGT
CGCCTCGGCT TTAAACGCCT GTATCTGGAA ACCGGCACCG CCGATTACTT CCTGCCCGCG
CAGCGGCTGT ACCTGGCCCA CGGCTTTGAG GTCTGTGCCC CCTTTGGGCA TTACCGCGAA
GATCCCCACA GCCTGTTTAT GACCAAGGCC CTGTGA
 
Protein sequence
MNIKLDDLSH PAVARLLHEH LEDMYDNSPA DSVHALDLAR LKQRDIRFYT LWQGNTLAAC 
GAVKQVDFHS GEIKSMRATR ALRGRGFGHA MLMHLENESR RLGFKRLYLE TGTADYFLPA
QRLYLAHGFE VCAPFGHYRE DPHSLFMTKA L