| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1094 |
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| Symbol | |
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| ID | 4603346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1320269 |
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| End bp | 1321003 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780441 |
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| Product | hypothetical protein |
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| Protein accession | YP_926971 |
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| Protein GI | 119774231 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.396494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCAGGC GCTTTCTCTT TGCGACATTG TCCTTATGTG CTTTCGTTGC CTCGGCAGGG
CAGCTGCGAG CCTGTATCGA TGAGTTTCCC CCTTATCAAA GCCTGATGCC TGAACCCCAT
GGGAATAACA TTGCCGCATT GAGGCTGTTT GCCAAACTGA TAGACCATGA TCCTGTGTTC
TTGCCCAGCC CGAACTTTGC CCGCTGTCAG CGCATGCTGG ACATGGGGGA TGCCGATATT
GTTGCGGGTG TCATTGCCAG TCCGGAGCGG CAGCAGCGAT GGATACTTTT GCCCTACCGC
CGGGATAGCC GTTACCTTTT TCTGACCAGG CCCGGCGGCG TCACCGTGAG CCGCTATGAT
AATTTACTGG GGCACAGTAT CGCTGTAAGT CGTAACACCA TGTATTTTGA TTACTTTGAT
AATGACAGTC GTTTGAAAAA ACAGGTGGTC GGTGACCTGG TCACGGGGGT GAGAATGTTG
CTGGCAGACA GGGTTGATGT GGTGATAGCC CCGGAAAATG CCCTGCCGTT CCTGAGCCGT
GAGTTCTCAA ACTTTGCCCA TGCAGTGCAG GTATCAGAGT ACCGATATCA GGAGGACCGG
GTTATCCAGT TTGCTTTAAG CCGACAACAC CGCCTGGATA TCGATGAGCA AAGGCTGCGG
CGGGTGATTA CCGAGGCCTT TGAGCAATCC TTGTTTGAGT CGGCGCTGCA GGCCATGCCC
GCCAGCGCCC AGTAG
|
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| Protein sequence | MVRRFLFATL SLCAFVASAG QLRACIDEFP PYQSLMPEPH GNNIAALRLF AKLIDHDPVF
LPSPNFARCQ RMLDMGDADI VAGVIASPER QQRWILLPYR RDSRYLFLTR PGGVTVSRYD
NLLGHSIAVS RNTMYFDYFD NDSRLKKQVV GDLVTGVRML LADRVDVVIA PENALPFLSR
EFSNFAHAVQ VSEYRYQEDR VIQFALSRQH RLDIDEQRLR RVITEAFEQS LFESALQAMP
ASAQ
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