| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1086 |
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| Symbol | |
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| ID | 4603338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1313537 |
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| End bp | 1314901 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639780433 |
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| Product | Fmu (Sun) |
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| Protein accession | YP_926963 |
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| Protein GI | 119774223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.694942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACC CAGCACCTCT CTCGTCGGCC GAGCGCCGCG CCATCAGTTA TGCCAACACC
CTGCATCTGC TGGTGTCGCA TATTTTTAAG CAGCGCGAAG GCGCCGACCG GGTACTGGCC
AACTATTTCC GTGAGCACAA AAAGCACGGT TCCAAAGACC GTAAGCTTAT CCGTGAAACC
CTGTTTGGCC TGTTCCGTTG GTGGGGCTGG CTGAAAAACC TGCCTGCGGC CGATGACGCC
AATGCCAATA TTGAAGACTC GGGCTTTTCC TCTGGCTTGG GCGAGGCCCA CAGCCCGCGT
TGGTTTACCC AATTAAGCCT GGTGGCCGCC ATTGAAAATC ATCAATGGCA GGATATTCGC
AGCGGTTGGC TTTCTCAGGC CAATCTGTCT CAGTTGGAAA TACCTGCCTT TGGCGATACG
CCAGAAAACC TCAACATCAT TTGCGCCGCC TTAATTAAGC AGTTTGGTGG TGAATTCGCC
CCGCCGAACC TCCTTCCCGA CTGGGCCTGG GAGCACATCA GCGTGGCCGG GAGTGACAAG
CTCGCCTTTG TCGATGCCCT GTGCCGCCGC CCGCCCCTGT GGACCCGCGC CCAGGGAACA
AGCCGCGAAC AGGTGCTCAA GCAGCTTGAG GCAGATGACA TCGGCGCCGT TCCAAGTAAG
GTGTTTGCTG ATGCCATCGA GCTTGCCAGC CAAAGCATCA ATCTGGATGC GGTGACGGCC
TATACGTCGG GCAAGCTTGA GGTGCAGGAT TTGGCTTCTC AGGCCATTGG TGAAGTGGCA
GCTCCCAAGG CGGGCGAGCG TTGGTGGGAT GCCTGCGCAG GCGCAGGCGG TAAGAGCCTG
CAGCTTTTCT CACTCATGCA AAAACGCGGC GGCGTGGGTG AACTCGTCGC CTCAGATATT
CGTCCCAAGG CACTGGAAGA ACTGCTGCGC CGCGCCGACA AAGCCGGGGT TGCGCCGATT
CAGCTCAGCC CCTGGCGCAG CGACAAGCTG CCGGTCAAGG CAGACTATTT TGATGGCGTG
CTGGTGGATG CGCCCTGCTC CTGTACCGGC ACCTGGCGCC GCAACCCAGA CATGCGCTGG
ATTGATGATG CATCAGCTAT TTTGGACAAG CCCGCGCTGC AGCTGGATAT TTTGCGCCGC
GCCAGCGCCG CCGTGCGCAG CGGCGGCGTG CTGGTGTACG CCACCTGCTC CTTGGCCCGC
GCCGAAAACG AAGCCGTGGT CGAGGCCTTT TTGGCCTCAG ATGAAGATTT TGAACTTGAT
ACCACCGCAC ATCCCTTCAG TGGTGAACAC TGCGCGGTTA TGACCCTTTG GCCGCAGCAG
GCCAATGCCG ACGGTATGTT TGTGGCCCGC ATGCGACGCC GCTGA
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| Protein sequence | MSHPAPLSSA ERRAISYANT LHLLVSHIFK QREGADRVLA NYFREHKKHG SKDRKLIRET
LFGLFRWWGW LKNLPAADDA NANIEDSGFS SGLGEAHSPR WFTQLSLVAA IENHQWQDIR
SGWLSQANLS QLEIPAFGDT PENLNIICAA LIKQFGGEFA PPNLLPDWAW EHISVAGSDK
LAFVDALCRR PPLWTRAQGT SREQVLKQLE ADDIGAVPSK VFADAIELAS QSINLDAVTA
YTSGKLEVQD LASQAIGEVA APKAGERWWD ACAGAGGKSL QLFSLMQKRG GVGELVASDI
RPKALEELLR RADKAGVAPI QLSPWRSDKL PVKADYFDGV LVDAPCSCTG TWRRNPDMRW
IDDASAILDK PALQLDILRR ASAAVRSGGV LVYATCSLAR AENEAVVEAF LASDEDFELD
TTAHPFSGEH CAVMTLWPQQ ANADGMFVAR MRRR
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