Gene Sama_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1082 
Symbol 
ID4603334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1309695 
End bp1310219 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID639780429 
Productacetyltransferase 
Protein accessionYP_926959 
Protein GI119774219 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.133951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.398011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAA TCCTCACCAT CAGCCAAGCC AGTTGCGATG AAGACGTTGT CGCCGCAGCA 
GATCTCATTG ATAGCCGGGA TGATAACCAT CATCCCCTCG ACAGAGCAGC ACTGGCCAAG
GCCAGATTGC TTCTGCTGGC ACGGCTCGAT GGCAGGCTGG TGGGCTGTGG TGCCATTAAG
GCCGGTGACG GCGAGGTGGC AGAATTAGGC TATCTGGTAG TGGCATCCCA GTATCGACGC
CTCGGCATTG GCGCCAGACT CACCCAGGCA CGGATTGACT GGGCCAGAGC ACAGGGGATA
AAACTGCTGT GGGCGACGGT AAGAGCGGAA AACCAGGCCA GTCGTGAGAA TCTACTGAAG
GCCGGCTGGC AGTTTTATGG GGACTACCTC AGTATTCGCG GCACCGGAAA TACCATTGGT
TGGTATGTGT TGCCGCTGCA GCAAGGGCTC GACATTCAAG CCTTAATGGC GGGCCCCATA
GGCAGCAGAA CCCCCGTCAG TCAGGGGCGC GGGGCGCACG GCTGA
 
Protein sequence
MTPILTISQA SCDEDVVAAA DLIDSRDDNH HPLDRAALAK ARLLLLARLD GRLVGCGAIK 
AGDGEVAELG YLVVASQYRR LGIGARLTQA RIDWARAQGI KLLWATVRAE NQASRENLLK
AGWQFYGDYL SIRGTGNTIG WYVLPLQQGL DIQALMAGPI GSRTPVSQGR GAHG