| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1070 |
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| Symbol | |
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| ID | 4603322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1295905 |
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| End bp | 1296750 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780417 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_926947 |
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| Protein GI | 119774207 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.703712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG TGAAAATTGG ACTGGTCCTG ATACTGTTTT CCTGGCCCAC ATTCGCGGTC
CAGACGCAGA CAATCTGCCA AGCACCGCTG CATGTTGCCT ACAATGACTG GCCTCCTTAC
TCCTGGTCCG ATGAAGTTGG CGAACCATTG GGGCTGGATG TTGACCTTTT GAAAGCCTTT
GCCCGCCGGG TTGGCTGTGT ACTCGAGTTT GATAAAATGC CGGCTCGTCG CTCCCATCAG
CTGATGCATC TGGGAAAGGT GGATATCATG ATGGGCGCCA GTAAAACGGC AGAACGGGAG
GAGTATGCCC ACTTCTCGGT GCCTTATCGA CTGGAGCAGG TGGGGCTTTT CAGTATAGAT
AATGGCGGCG TTGTCTCTTT GGGCAGTTGG CAGCAGGTGC TCGACAGCAG TCTTAAGCTA
CTGGTACCGC AGGCGGGCTG GTACGGTGAA GCGTACGAGA GTTCAAAGCG CAGCCTGGCA
ATGCACAATC AGCTGGTGGA AAGCCCTGAC CTGCTCAAGA GCGTACAAAT GCTGTCGCGG
GGCCGTGCCG AGCTTGCCAT TGGTGATGCA CTCTCGTTGC CCTTTATTGC CAGCCAACAT
GAAAAAGTTC ATCTGTTCCG CCATCCGCTT CGTTTAACCG AAAGCGACAT ACACCTGATG
TTCAGCCGCG CAACCTTCGA CGAAGCCAGG GTCAGGGCTT TTAATGATGC CATTCGCGGT
GCGGCCGAGG ATGGTGAAAT CGCCTCCTTG CTACTCAAGT GGGAGCAAAT ATCCCTAAGT
CGTATCGAAG GCGTATCACA AAAGTCCAGA GGCTCGGATG AGCCCATTTG GATCCTGGCC
GACTGA
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| Protein sequence | MQAVKIGLVL ILFSWPTFAV QTQTICQAPL HVAYNDWPPY SWSDEVGEPL GLDVDLLKAF
ARRVGCVLEF DKMPARRSHQ LMHLGKVDIM MGASKTAERE EYAHFSVPYR LEQVGLFSID
NGGVVSLGSW QQVLDSSLKL LVPQAGWYGE AYESSKRSLA MHNQLVESPD LLKSVQMLSR
GRAELAIGDA LSLPFIASQH EKVHLFRHPL RLTESDIHLM FSRATFDEAR VRAFNDAIRG
AAEDGEIASL LLKWEQISLS RIEGVSQKSR GSDEPIWILA D
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