| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1028 |
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| Symbol | |
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| ID | 4603280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1243869 |
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| End bp | 1244771 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780367 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_926905 |
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| Protein GI | 119774165 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAGC ATCCGGGCAG CGAACTTGAA TTGATTTACC TCTTTGTGCA GCTGGTGGAC
GCCGGTAGCC TGTCTGCCGT GGCCGACCGC CTTTCGATGC CGGTGGCGAC TGTCAGTCGT
AAATTATCCC GCCTGGAAGA AAACCGAGGC CGTCAGCTGT TGATGCGAAG CACCCGCAAA
ATTCGCCTCA CCGAAGAGGG TATGGCGCTT TACGAGCGTT ACAAGTCTCT GGTGAGCGCC
GTGGACGCCC TTTATGGTGA TGGCGAAGAC CCGCTGGAAG GCACGCTGCG TATTGCCGCC
CCCATCTCTA TCATCTCGAT GATTTTTATG AAAACCATTA ACGAGTTTCG GCGGGAATAT
CCGGGGATCA GGCTGCATAT CACCCAAAAA AACGAGGTAG TCGACCTTAT CGACAAGGGC
ATAGATATCG CCATCGTGGG CGGTATTCAG CCGGACTCGT CCTGGATAGC GGTACCCCTT
GGGACACTGG ATTACCGCCT GGTGGCGTCG CCTGGGTATC TGCAGCGCCG GGGCATGCCA
ACTCATCCCA GCAGCCTTGC TGCCCACGAC ATCATCAAGG TATGGCCTTT GTATAACTGG
TCGCTGAGGC ATCCACAGGG GGAGGCCTTC TATTATGACG GACCCGCGAG CCTGACGCTG
ACCGACCTGC AGGGGGCTAT CAGTGCCTGT GTGGATGATG GTGGCATATT GTATGGGCCG
GAACTCTTCT TTAAACAGGA GCTGCAACGG GGCCTGCTGT TGCCGGTATT GCCGGATTGG
CGGGGAGAAA CGCGGCGGAT TTCGATTTTG TGTCACCAGC GGCAGCAACA ACCTGCCAAG
GTAAAAGCCT TTATCGATTT TATGAAGTCG CGGGCGCCGG GGTTATTTAC GATGGACGCT
TAA
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| Protein sequence | MREHPGSELE LIYLFVQLVD AGSLSAVADR LSMPVATVSR KLSRLEENRG RQLLMRSTRK
IRLTEEGMAL YERYKSLVSA VDALYGDGED PLEGTLRIAA PISIISMIFM KTINEFRREY
PGIRLHITQK NEVVDLIDKG IDIAIVGGIQ PDSSWIAVPL GTLDYRLVAS PGYLQRRGMP
THPSSLAAHD IIKVWPLYNW SLRHPQGEAF YYDGPASLTL TDLQGAISAC VDDGGILYGP
ELFFKQELQR GLLLPVLPDW RGETRRISIL CHQRQQQPAK VKAFIDFMKS RAPGLFTMDA
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