| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0997 |
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| Symbol | |
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| ID | 4603249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1209323 |
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| End bp | 1210159 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780336 |
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| Product | peptidase U32 |
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| Protein accession | YP_926874 |
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| Protein GI | 119774134 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA GTCTGGGTCC CCTGCTCTAC TGTTGGGACA AAGCCAAAGT TTTTGAGTTT
TACCGGGCAA TAGCCCAAAG CGATATCGCG TTGGTGTATC TGGGTGAAGC GGTATGCAGT
CGCCGGCGCG AGCTGAAAAC CAGCGACTAT CTGACATTGG CCCGCGAACT GCGGGATGCC
GGTAAAGAGG TGGTGCTCAC CAGTCTGGCT TTGATTGAAG CCGCTGGAGA ATTGACTGAA
CTTAAAAAAC TGGTCAGTAA CGGCGAGTTT ATCATCGAAG CCAACGACAT GGCCGCAGTA
CACCATGCCC GCGAAGCGGC AGTACCCTTT GTGTGTGGCC CCCACATCAA CCTTTACAAT
GCCGCCAGCA TCCGCAAACT GGCCGACTGG GGGATGCAGC GCTTTGTCAT GCCGGTCGAA
CTTTCCCGTG ATTGGCTGGC TGAGGTTTTG AGCCAGCTGG GTTCGTCACG GCCCGAAGTA
GAGGTGTTGG GCCACGGGCA CATACCACTT GCCCACTCGG CTCGCTGTTT TACTGCCCGC
CACCATGGCC TGGCTAAAGA TGGTTGTCAG ATAATCTGCA AAAACCACAG CAAGGGCCTC
TTGGTGCAAA CTCAGGAATC TCAGCCGCTG CTCAGGCTCA ACGGCATCCA AACCCAGTCT
GCGGCCTGTG TGAATCTGGC CAGCGAATGG CACAATATGG CCGCGATGGG CGTGGATTGG
TTCCGGATTT CCCCAAGTGG CATGTCGCTG CCAAACCTGG AAATCTCCAC CCCGCTATCG
GGGAATGAAT GTAATGGATA CTGGTTTGGT GAAGCGGGAT TTAATCAGGC CGTCTGA
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| Protein sequence | MKSSLGPLLY CWDKAKVFEF YRAIAQSDIA LVYLGEAVCS RRRELKTSDY LTLARELRDA
GKEVVLTSLA LIEAAGELTE LKKLVSNGEF IIEANDMAAV HHAREAAVPF VCGPHINLYN
AASIRKLADW GMQRFVMPVE LSRDWLAEVL SQLGSSRPEV EVLGHGHIPL AHSARCFTAR
HHGLAKDGCQ IICKNHSKGL LVQTQESQPL LRLNGIQTQS AACVNLASEW HNMAAMGVDW
FRISPSGMSL PNLEISTPLS GNECNGYWFG EAGFNQAV
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