| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0979 |
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| Symbol | |
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| ID | 4603231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1183073 |
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| End bp | 1184050 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780318 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_926856 |
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| Protein GI | 119774116 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0862357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGA TTTTGACTCA AGCTTCATCC AACTCTCTGC AAAAAGACAC GATTTTCCAG
CAATCGTTGT TTTTACCTTA CGACGGCGGT CAGTTGCACC TGAGGCATAT CAGTCCCGCT
TCCCCTGCTG CTGCGCGCTC CCCCTTGCTG ATGCTTCATG GTGCCATGTC CAACGGCCGG
GTGTTTTACA GTGAGTCCGG GCGGGGGCTG GCGAGCTTTT TGGCCCGGCA GGGGTTTGAG
GTGTATGTCC TCGATACGGC GGGACGGGGC CTCAGTACTC CCAAGCTGTC CAAAGGCGTT
GATCCGGGGC AGGGCAAGGT GATCCGTGAA CAGTTACCCC TGGTACAGGC ATTCATTCTT
GAGCGCCATC CGTTAACGCA GGGGGTACAC TGGTGTGGCC ACTCCTGGGG TGGGGTTCTC
ATGGCAAGCA GTTTGGTGAG ATACCCGGAT ATGGCCGCCA GGGTACGATC TTTACTGACT
TTTGGCAGCA AAAGAACCAT ACGAACCCGC TCATTGAAAA AATGGTGGAT GGTGGACATG
TTCTGGAACC GGCTTGCACC TGCCATCGCC ACACAGCGCG GTTATTTACC CGCCGATAGC
CTGAAACTCG GTATGGATAA CGAGAGTATC AGTTCCCTGT GCGAGAGTAT CGACTGGGTC
CGTGGTGATT GGATAGATCA TGATGACGGC TTTGATTACG CAGCAGCCGC AAGGGTTAAA
GGTATACCGC CAGCCTGGTT TATTGCCGGC GCCCGGGATA CTGTGCTGGG TAACCCCAGT
GATGTGAAAG ACATGATGGC AGAATGCTGC GCTGCTGATG CCCGCTTTAC CTTGCTGTCC
AGGGCGCATG GATATCGCCA CGACTATGAC CATGCGGGCA TGCTGACACA TCTTGATGCC
CCATCAGATC ATTTTATGGA GGTAGCAGAC TGGTTGCTTG GTTTTGATAT GACGGCGCTC
AAAGACCCGG TTAACTGA
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| Protein sequence | MTAILTQASS NSLQKDTIFQ QSLFLPYDGG QLHLRHISPA SPAAARSPLL MLHGAMSNGR
VFYSESGRGL ASFLARQGFE VYVLDTAGRG LSTPKLSKGV DPGQGKVIRE QLPLVQAFIL
ERHPLTQGVH WCGHSWGGVL MASSLVRYPD MAARVRSLLT FGSKRTIRTR SLKKWWMVDM
FWNRLAPAIA TQRGYLPADS LKLGMDNESI SSLCESIDWV RGDWIDHDDG FDYAAAARVK
GIPPAWFIAG ARDTVLGNPS DVKDMMAECC AADARFTLLS RAHGYRHDYD HAGMLTHLDA
PSDHFMEVAD WLLGFDMTAL KDPVN
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