| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0977 |
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| Symbol | |
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| ID | 4603229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1181164 |
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| End bp | 1181988 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780316 |
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| Product | membrane protein |
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| Protein accession | YP_926854 |
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| Protein GI | 119774114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0130473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGCT CAAAGCGTCA ATTTTTAAGG GTCAAGGTGT TGTATCTTAA AGGACTAAAG
AAAAGCCAGA AAATCAGCCG ACTGCTGCAG ATTGCCATTG CACTGGCGCT GCTGGCGGGG
CTTGTCCAGC TGTGGCAGTC AAGCCTACTA CAAGGCCAGC AGCTTCTGAA GTCCCAAACC
GAAAAGATGG CAAGATTGTT GGTACAACAG ACGGCCTATG GCGCTGCACC GGCGTTGCTG
TTACAGAACG ATGAACAGTT GCAGTGGCTA GCCACAGCCC TGGTGGAAGA TCCCAAGGTG
ATGGCGGCAG CCATCTATGG CGAACAGGGC ACTCGCCTCT CCTTCGCCCA GAGTTTGTCG
TCCGAGTGGC TGGAGCCCGA TTCTGAGGAG CTGAAAGACC TGCTCGCGCC TTTTCCTCCC
TATGTAGAAC CCGTAATGCA GGGAGACAGA AACCTGGGTT ATGTCGAGGT ACGCCTGGAA
CCCAAGTTGT TTTTGGCCGA GATTGAAGAA GCTCACAAAC TTAATATGGA GCAGCAGCAA
ATTATGCTGT TGGTGGCGGG TTTGATTGGC ATGCTCTTGT CTCGCTCTAT GTCATTTAAG
CGCGCCCACT TTGACCGACG CAAATTTAAA GCCAAACGCT TGCTTGCCAC TATGACGGGT
GAAAGACCGG AAGAAGTGAT GCGCCCGATG GAAATGCAGC CGGAACAAGA TGCGTCAGAG
ACGGAAAAAG CGTGTCAGGC CCTGGATTCG GCCGCGATGG CGGATTCAGA AATCAGCAAC
GCGACTAATA CCGATAAAGA GGATGCTGCA GGTAAAGGCC GCTGA
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| Protein sequence | MISSKRQFLR VKVLYLKGLK KSQKISRLLQ IAIALALLAG LVQLWQSSLL QGQQLLKSQT
EKMARLLVQQ TAYGAAPALL LQNDEQLQWL ATALVEDPKV MAAAIYGEQG TRLSFAQSLS
SEWLEPDSEE LKDLLAPFPP YVEPVMQGDR NLGYVEVRLE PKLFLAEIEE AHKLNMEQQQ
IMLLVAGLIG MLLSRSMSFK RAHFDRRKFK AKRLLATMTG ERPEEVMRPM EMQPEQDASE
TEKACQALDS AAMADSEISN ATNTDKEDAA GKGR
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