| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0964 |
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| Symbol | rpsO |
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| ID | 4605938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1165272 |
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| End bp | 1165541 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780303 |
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| Product | 30S ribosomal protein S15 |
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| Protein accession | YP_926841 |
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| Protein GI | 119774101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0184] Ribosomal protein S15P/S13E |
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| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0254424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0332501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACTAA GTACTGAAGC TAAAGCAAAA ATCCTGGCTG AGTTTGGCCG TGGTGAAAAC
GACACTGGTT CAACTGAAGT TCAGGTAGCT CTGCTGACTG CTCAGATCAA CCACCTGCAG
GATCACTTCA AGACTCATAT TCACGATCAC CACTCACGTC GTGGTCTGCT GCGTATGGTT
AGCTCTCGTC GTAAGCTGCT GTCTTACCTG CAGCGCACCG AGAATGAGCG TTACAACGCT
CTGATCCAGA AGCTGGGTCT GCGTCGCTAA
|
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| Protein sequence | MSLSTEAKAK ILAEFGRGEN DTGSTEVQVA LLTAQINHLQ DHFKTHIHDH HSRRGLLRMV
SSRRKLLSYL QRTENERYNA LIQKLGLRR
|
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