| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0928 |
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| Symbol | |
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| ID | 4603180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1121344 |
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| End bp | 1121862 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639780263 |
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| Product | type IV pilus assembly protein PilV |
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| Protein accession | YP_926805 |
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| Protein GI | 119774065 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT ATGGGAAAGG ATTTTCCTTA ATCGAAGTGA TGGTCGCACT GATAATACTG
GTGATCGGCC TTATTGGCAT TTTCAATCTG CATATCGTCT CGAAGCGAGG GAGTTTCGAG
TCATTTCAGC AGACCCAGGC TTCATACTAC GCCAACGATA TCATCAATCG AATGAAGCTG
AACCCGACCC AAATAGCTAA CTATGCAGGA ACCTATAGCG GAACGCCAAG TTCCGTTAGT
AAACAGTGTC AAGGTGCTTC CATTTGCTCA TCTTCGGAGA TGGTTGCCTG GGACTTGTAT
GAATGGCAAA CACAATTCAA TGGCGCTGCA GAGATAGTTG GAACTCAGAA TGTGGGTGGG
CTGGATACAC CTTCGGCGTG TATTCTGGTA AATGGGAATA ACGTTTTGGT TACTATGGCG
TGGAAAGGAA TTCGAGAAAC ATCAATTGAT TCAAATGCTT CTGATTGTGG TTCAACAACC
GCTAATCGAC GACTCTATTC AGTCCAAACG GTGATTTGA
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| Protein sequence | MKKYGKGFSL IEVMVALIIL VIGLIGIFNL HIVSKRGSFE SFQQTQASYY ANDIINRMKL
NPTQIANYAG TYSGTPSSVS KQCQGASICS SSEMVAWDLY EWQTQFNGAA EIVGTQNVGG
LDTPSACILV NGNNVLVTMA WKGIRETSID SNASDCGSTT ANRRLYSVQT VI
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