Gene Sama_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0817 
Symbol 
ID4603069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1001932 
End bp1002441 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content57% 
IMG OID639780151 
Producthypothetical protein 
Protein accessionYP_926694 
Protein GI119773954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC GATGGTTTTT GCTTGTCAGC GCCGCTGTGT ACACTGCCGC CTGGTGGCTT 
GCAGTGCTTT GGCAAGGCGA GGGACTGATT TGGCTGTGTC TGCTACTGCT GGTGCATTTT
GCCTTAAGTC CAACGCGGCT TAAGGATTTC CGGCTGCTGC CACTGGCACT TATCGGCATG
ACCATGGACA CCCTGCTCAT GTACGCAGGG GTGTATGAGT TCAGCGCCAT GCCAGTGTGG
CTTATGTTGC TGTGGCTGCA TTTTTTACTC GCCATGGGCC ATTGCATCGC CTGGCTTGGC
AAGCAACCCA TCTGGGTGCA GGTATTTACC GGTGTGTTCG GCGGTGCAGG CAGCTACATT
GCCGGGGCAG AGCTTGGTGC CGTGGCGATG CCCCTTGGCA ATCTGCTCAC CTTCCTGCTT
ATCGCGCCCC TCTGGGGGAC GATTATTCCC GGCTTCTTTT GGCTGCAGCA AAGGCTGCCA
GGCAACGGAG ACTACCTATC ATGGCGATAA
 
Protein sequence
MSQRWFLLVS AAVYTAAWWL AVLWQGEGLI WLCLLLLVHF ALSPTRLKDF RLLPLALIGM 
TMDTLLMYAG VYEFSAMPVW LMLLWLHFLL AMGHCIAWLG KQPIWVQVFT GVFGGAGSYI
AGAELGAVAM PLGNLLTFLL IAPLWGTIIP GFFWLQQRLP GNGDYLSWR