| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0811 |
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| Symbol | |
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| ID | 4603063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 995865 |
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| End bp | 997292 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780145 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_926688 |
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| Protein GI | 119773948 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAC TTGTCTGGTT CAGGCAGGAT CTTCGCACCA TAGATAACCA GGCGCTGACC
CGGGCGTGTG AAGATGCCAA CGCCCGTGGT GGCAAGGTGC ATGCGCTCTT TATCGCCAGT
CCGGGCCAGT GGCAACGGCA TGACATGGGT GTGCGTCAGC AGCGATTTTT ACTGGCTAAT
CTCAATGCGT TGGGTGAAGA GCTTGCCAGT ATGGGGATTC CGCTGTCGTT GCTGAAGGTG
GATTTTTTTT ATCAAACCGC AGCGGCCCTC AAGGCGTTTT GTAAAGAACA CGGTATCTCC
AGCATCTTCG CCGGGGCGCA AATCGAGATT GATGAGCGCA GGCGCGATCA GGCACTTCTG
GATAAAGGCT TCCCGCTGCA ACTGACCGAT GAGCACTGCA TGCTGCCCCC CGGCAGTGTG
GTCACTCAGG GACAGCGGGA TCAGGGAGGC GCCATGTACC GGGTATTTAC CCCATTTGCC
CGTCGCTGGC GTGAAATAGC CGCTTCCCGC TCGCTTTGGC CTATTCCTGC GCCCGCGTCT
GTGGCAACGC CGGTGGTATT CACCCCCTTC GCGTTTTGGG GAGATATTAA CGATGATCCT
GCGCTTGATA AATGGCCTGT TGGGCAGGAT GCGGCATTGG AAAAACTATC GCGTTTTCGA
GAGCTTGGCA TGGGCCGCTA CGGCGAGAAT CGCGACTTCC CGGCCATTGA CGGCACCAGC
AGTCTGTCGC CCTATCTGGC GCTCGGGGTG ATATCTCCCC GACAGTGTCT GGCGGCGCTG
CTGGAAGACT TTCCCGACGT CTTTGTGAAT GAATCCTCAC CGGCCCGTCC TTGGCTGAAT
GAGTTGGTGT GGCGCGAATT TTACCGGCAT CTGCTGGTGG CTTTCCCGGG TCTGAGCATG
GCAAAGAACT TTAACCCCCT CGGTGACGGC ATTCGCTGGC GCAATGATGA AACAGAATTT
GAGGCCTGGA AACACGGCCG TACCGGCTAT CCGCTGGTGG ATGCTGCAAT GCGACAACTT
AATCAAACCG GCTGGATGCA CAACCGGCTC AGGATGGTGG TTGCCAGCTT TCTAACCAAG
CATCTGCTTA TCGACTGGCG CTGGGGTGAG CGATATTTTC GCGAGCAGCT CATCGATGGT
TGCCTTGCGG CTAACAACGG TGGTTGGCAG TGGGCCGCCG GCACAGGTTG TGATGCCCAG
CCTTACTTTC GGATCTTTAA CCCTATGAGT CAGTCGGAAA AATTTGATCC CGAAGGACGC
TTTATCCGTA AGTACCTACC AGAATTAGCG CAGTGGCCGA CCAGGTCATT GCACCAGGCA
AGTGGGCCGG GGCTGTTTGA TTCCAGCGGC TATCCGTCTC CGATTGTTGA GCACACCCAA
GCCCGAGTCA GGGCGCTGGA TGTGATGGCC GTGATGAAGA AGGGTTAG
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| Protein sequence | MNTLVWFRQD LRTIDNQALT RACEDANARG GKVHALFIAS PGQWQRHDMG VRQQRFLLAN
LNALGEELAS MGIPLSLLKV DFFYQTAAAL KAFCKEHGIS SIFAGAQIEI DERRRDQALL
DKGFPLQLTD EHCMLPPGSV VTQGQRDQGG AMYRVFTPFA RRWREIAASR SLWPIPAPAS
VATPVVFTPF AFWGDINDDP ALDKWPVGQD AALEKLSRFR ELGMGRYGEN RDFPAIDGTS
SLSPYLALGV ISPRQCLAAL LEDFPDVFVN ESSPARPWLN ELVWREFYRH LLVAFPGLSM
AKNFNPLGDG IRWRNDETEF EAWKHGRTGY PLVDAAMRQL NQTGWMHNRL RMVVASFLTK
HLLIDWRWGE RYFREQLIDG CLAANNGGWQ WAAGTGCDAQ PYFRIFNPMS QSEKFDPEGR
FIRKYLPELA QWPTRSLHQA SGPGLFDSSG YPSPIVEHTQ ARVRALDVMA VMKKG
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