| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0641 |
|---|
| Symbol | |
|---|
| ID | 4602894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 796210 |
|---|
| End bp | 797187 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639779976 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926519 |
|---|
| Protein GI | 119773779 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000056191 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAATA AGTTCAACCT ATGTAATCTG TGGCTGGCAC TGGTTTTTGT GCTCTTGTCA
GGCTGTTCCC CGAAGGAAGC CGATGGGGTG TTGGTGCTCA GTGACGCACC AAGTTATGGT
GCAACCCTGA GCCAGGATGC CAGCCTGGCG CTCATCAGCA CCGAGTCCGC TGGTGTTGAG
CTGTGGCAAC TCTCTCCCAA AACCCTCAAG CACAGATGGC AGCACGGACC AACCAGTAAC
GAGTCCATTG CCCTTGCCCT GTCGGACAAC GGCGTTTATG CCGCCTCATT AAGCCGGGAT
TCAGTTGCAC TGTGGAGGAT AGATGACGGC GCTCAGGTGG GGCTTTGGTC ACTGCCCTCA
GCCGGGCAGG CGCTGGCGCT TTCTGATGGC GGTGGCCTCT TGATAGGACT CGCCGATGGC
TCAGTGATGT CTCTCGTGGC CGGGCAAACC AAACTTATCC GTTTCCTTGG ACACAGCGAG
AAGGTCAACA GCGTGGCGCT GTCGGCCGAT GGCAAGCTGG CACTCAGCGG AGGCAACGAC
TATCAAGCCA TTCTCTGGCA GGCCGATACC GGACAGCCAT TGCAAACTCA GCAATTTGAC
GCTCGGGTAC TGGCAGTGGC GATATCCTCC GACGGTGAGC TGGCCTTTGC CGCCGACGCC
AAGGCCGATG CCCGGATTTT TGCCAGCCAA ACAGGCAAAG TCATCAGCGA ATTACGGATA
AAGCAGCGCA CCATGACCTT TTCTGCCGCC CGCTTCAGCC AAAGCAATAC GGCCTTGCTC
ACGGGAACCC CCTTTCGGGA AGTGCTTCGC TGGCAAACAA AAGATGGAAA AGTAACCGGT
CGCTGGCAGG TAAGTCTCTC CAATCGACCG CAAAACAAAG GTGCCGTTGT ATACTCAGTG
GCCGAAACCG GCCTGCCACA AACACCTGTT GCCAGTATCA GCAGCAGTGG CAGAGTGGAA
TACTGGTCAA CGAGGTAA
|
|---|
| Protein sequence | MWNKFNLCNL WLALVFVLLS GCSPKEADGV LVLSDAPSYG ATLSQDASLA LISTESAGVE
LWQLSPKTLK HRWQHGPTSN ESIALALSDN GVYAASLSRD SVALWRIDDG AQVGLWSLPS
AGQALALSDG GGLLIGLADG SVMSLVAGQT KLIRFLGHSE KVNSVALSAD GKLALSGGND
YQAILWQADT GQPLQTQQFD ARVLAVAISS DGELAFAADA KADARIFASQ TGKVISELRI
KQRTMTFSAA RFSQSNTALL TGTPFREVLR WQTKDGKVTG RWQVSLSNRP QNKGAVVYSV
AETGLPQTPV ASISSSGRVE YWSTR
|
|---|
| |