| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0639 |
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| Symbol | |
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| ID | 4602892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 795431 |
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| End bp | 795955 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779974 |
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| Product | peptide deformylase |
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| Protein accession | YP_926517 |
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| Protein GI | 119773777 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000242683 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.990188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA TCCAAACCGC CCCCATCGCC ATCACAGGTG ACCCGGTGCT CTACCAAAAA
GCCGCACCTG TCACTGTATT TGATGACAGT CTGGAGAGGC TTTCGCAAAC CCTGATGGCC
ACCATGTTGC AGGCCAAAGG CGTGGGTATA GCCGCGCCTC AGATTGGTGT GAGCCAGCGG
CTTTTCATCG TCGCATCCCG CCCCAATGAG CGTTATCCCG ATGCGCCCCT GATGGAGCCC
ATGGTGATGG TCAATCCTGC GCTGCTGTCG GGATCTTCAG AATGGGAATC GAGTGAAGAA
GGCTGTCTGT CGGTTCCGGG AAAAAGGCTG TCTATCGCTC GCCATCGCTG GGTCGAAGCC
AAGTGGCAGG ACTTACAGGG CAATGCTTAC TCCGGTCGTC TTGATGGTTT TATTGCCCGA
ATCTTTCAGC ATGAGCTGGA CCATCTCGAT GGCATCACCC TGTTGGAACG CGTCACCATG
GCCGCACAAG CGCACACGAT GAACGCGGGA GAGACGCCAC TGTGA
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| Protein sequence | MASIQTAPIA ITGDPVLYQK AAPVTVFDDS LERLSQTLMA TMLQAKGVGI AAPQIGVSQR
LFIVASRPNE RYPDAPLMEP MVMVNPALLS GSSEWESSEE GCLSVPGKRL SIARHRWVEA
KWQDLQGNAY SGRLDGFIAR IFQHELDHLD GITLLERVTM AAQAHTMNAG ETPL
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