| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0629 |
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| Symbol | |
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| ID | 4602882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 781189 |
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| End bp | 782403 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779964 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_926507 |
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| Protein GI | 119773767 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.740103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAG TGGACGTGCT GGTGGTGGGT GGCGGCATTG CTGGCGTGGG CATAGCCCAG
TTTGCTGCTG CGGCCGGATA TTCGGTGGCC TTGATTGAAC GGCAGCGGAT AGGTGAAGCG
ACCTCCGGCA ATTCCAGCAA ACTCATCCAT GGCGGCCTGA GATATCTGGA GACTATGCAG
TTGGACCTTG TGCGTAAGTC GCTCAAAGAG AGACGCGCAC TGCTACAGCT GGCGCCGTCT
CTGGTGACGG CCGTCCCCTT TTATTTTCCT GTGTATCGCA ACAGTCGCCG TGGAGCACTC
ACTATCAGGG CGGGCTTGTC CCTGTATGGG CTCTTAAGCG AGTTCGATGC CCTCGGCCGC
TTTAAAACTC TGAGCAAGTC TCAGTGGTCC AGGTTACAGG GATTAAACAG CGCCGGGCTT
GAGACTGTGT TCCAATATTG GGATGCACAA ACTGACGACA GGCTGCTGTG TGAGGCGGTG
GCGCACAGTG CAATCCTGCT CGGAACTGAT GTGTTCGAAT GGGCTGAAGT GGAACACATA
CAGCACAGTG GTGATGGCTG TCAGGTGAGT TTTACACAGC AGGGACAGCA GCATGACATC
CAGGCGGGTG TGGTCATTAA CGCCTGCGGC CCCTGGGTGA ATCAGCTGCT GGAGAGGGTG
ACTCCAACCG TATCGGCGCT GGAGATTGAC TGGGTTCAGG GAGCGCACCT GCTGCTGGAC
ATACCGCCGG TCGACGGTGT GCTTTACCTT GAGTCCCCCA TCGACCAGAG GGTGGTGTTT
GTTATGCCCT GGTATGGCAA AACCTTGGTC GGCACCACAG AAACCCGGTT GACCCATTTG
GACAACAAGC CCGCCGTCAC CGAAGCGGAG AAACGCTACC TGTTGGCGCT CTACGCCCAC
TATTTCCCCG ATGCCGGCAA AGTGGATGAG CTGGAGAAAA AAGTGACTGA TACCTTTTGC
GGGGTCAGGG TGCTCCCCCG AAGTGGCGGT GATGCTTTTC ACGCCCCGAG GGATACCCTG
ATGCACACTT GCCGCTCTCA CCCAAGACTG CTGAGCCTTT ACGGCGGTAA ACTGACCACA
TTTCGCAGCA GTGCGGCCGA AGTGCTGGAT TGGGTGAGGG CACAACTGGG GGATAGAGCC
GCGATTGCCG ATGTGGATAA GCTGCCGCTG ACCCGTCCGG TAAACCGGGA TGATTTTATG
GCGCAAACAG GCTAA
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| Protein sequence | MKRVDVLVVG GGIAGVGIAQ FAAAAGYSVA LIERQRIGEA TSGNSSKLIH GGLRYLETMQ
LDLVRKSLKE RRALLQLAPS LVTAVPFYFP VYRNSRRGAL TIRAGLSLYG LLSEFDALGR
FKTLSKSQWS RLQGLNSAGL ETVFQYWDAQ TDDRLLCEAV AHSAILLGTD VFEWAEVEHI
QHSGDGCQVS FTQQGQQHDI QAGVVINACG PWVNQLLERV TPTVSALEID WVQGAHLLLD
IPPVDGVLYL ESPIDQRVVF VMPWYGKTLV GTTETRLTHL DNKPAVTEAE KRYLLALYAH
YFPDAGKVDE LEKKVTDTFC GVRVLPRSGG DAFHAPRDTL MHTCRSHPRL LSLYGGKLTT
FRSSAAEVLD WVRAQLGDRA AIADVDKLPL TRPVNRDDFM AQTG
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