| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0573 |
|---|
| Symbol | |
|---|
| ID | 4602826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 713799 |
|---|
| End bp | 715277 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639779908 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_926451 |
|---|
| Protein GI | 119773711 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1785] Alkaline phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.949232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.22493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA AATTATTGGC CCTGTTGCTG CTGGCCCTGC CCCTGACAGC CGCTGCGGCC
GATCCGCTTA AAACCCCGTC CAAGCCCAAG AACATGGTCA TCATGATTGG CGATGGCATG
GGGCCGGCTT ACACCTCGGC CTATCGTTAT TTTAAAGACA ACCCGGACAC CGAAGAAATC
GAGCAAACCG TGTTCGACCG TCTACTGGCG GGGATGGCGA GCACCTACCC GGCACCCGTG
TCCGGCTACG TGACCGACTC GGCCGCCGCT GCCACGGCGT TGGCAACCGG CCACAAGAGC
TATAACGGCG CCATTTCGGT GGATGTGAAC AAAGCTCCCC TGCCCACCCT GTTTGAGAAA
GCCCGGGAAG CCGGTTTAGC CACGGGCGTT GCCGTCTCCA GCCAGATAAA CCATGCCACT
CCGGCCGCAT TTCTGGCCCA CAATGAAAGC CGCAAAAATT ACGATGAAAT AGCCAGCGCC
ATATTGGGCA GTGATGCCCA GGTGCTGCTC GGCGGCGGTC AAAAGTATTT TGATGAGTCA
TTGCTCGCCG ACTACCGCGC CAAAGGCTAT CAGCATCTCA CCGACATCGG CGCGCTCGAC
ACCATTAGCA GCGGTAAGGT GTTGGGCCTC TTTGCCGAAG TGCAATTGCC CTGGGTGATA
GATAACCCGG AATCACACCA GCTTTCTCGT CTCACGGCCA AAGCGCTGGA GCTTCTCTCC
CAAAACGACA AAGGTTTTGT CCTGTTGGTG GAAGGCAGTC TGATTGATTG GGCGGGCCAC
AACAATGACA TAGTGACTGC CATGGCCGAG ATGGACGAGT TTGCCCGCGC CATTGAGGTG
GTGGAAGAAT TTGTTCGCAC CCGTGGCGAT ACCCTGATGG TGATTACTGC CGATCACAAT
ACCGGCGGTC TGAGCATAGG GGCAGATGAC CAATATCTGT GGGATGCCGC ACTGCTGCGT
GGAGTGAAGG CCAGTCCCGA CGCCATGGCA GCGGCTATCA TCGCCGGCGA TGTCTGGCAG
GAGCAGCTTG AAACACAATT GGGCTTTACC CTGGAGTCAG ATGAACAAGC AGCGATTTCA
CGGGCAAGAA TGCAGGGGCA GGACGTTTTA AGCAGTGCCA TAAAAACTAT GCTGGATAAA
CGCAGCTATA CCGGCTGGAC CAGTGGCGGA CACACAGCAC TCGATGTGCA GGTATTTGCC
CAAGGCCCCG CATCCGGACT CTTTATCGGT CACCAGGACA ACACTGAAAT CGCCCAGAAG
ATGATGAGCC TGCTACCTAA ACCTAAAAAG GCCGCCGCTG TGGTCGAACC CACAGCCCCG
TCGATAACCT TGCCACCGGA AGCGCCTGTC AGCGAAGCGC CCCTGGTGAA CCCAGTTGTG
CCGGAAACCG CACAGCCACA GGAAACAACA CAGGATGACG CGTTCAACCC AGGCTCTGAC
GTCAGTCAAG AGACTGAGAT TAGCGTAACC ACTCACTAA
|
|---|
| Protein sequence | MSSKLLALLL LALPLTAAAA DPLKTPSKPK NMVIMIGDGM GPAYTSAYRY FKDNPDTEEI
EQTVFDRLLA GMASTYPAPV SGYVTDSAAA ATALATGHKS YNGAISVDVN KAPLPTLFEK
AREAGLATGV AVSSQINHAT PAAFLAHNES RKNYDEIASA ILGSDAQVLL GGGQKYFDES
LLADYRAKGY QHLTDIGALD TISSGKVLGL FAEVQLPWVI DNPESHQLSR LTAKALELLS
QNDKGFVLLV EGSLIDWAGH NNDIVTAMAE MDEFARAIEV VEEFVRTRGD TLMVITADHN
TGGLSIGADD QYLWDAALLR GVKASPDAMA AAIIAGDVWQ EQLETQLGFT LESDEQAAIS
RARMQGQDVL SSAIKTMLDK RSYTGWTSGG HTALDVQVFA QGPASGLFIG HQDNTEIAQK
MMSLLPKPKK AAAVVEPTAP SITLPPEAPV SEAPLVNPVV PETAQPQETT QDDAFNPGSD
VSQETEISVT TH
|
|---|
| |