Gene Sama_0558 details

Gene Information

• Locus tag: Sama_0558
• ID: 4606036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella amazonensis SB2B
• Kingdom: Bacteria
• Replicon accession: NC_008700
• Strand: +
• Start bp: 693651
• End bp: 694433
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639779893
• Product: hypothetical protein
• Protein accession: YP_926436
• Protein GI: 119773696

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.212613
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAACTCC TTATTATCGC GCTGGTTGCC ATGCTGACTT CCGGGATGAC CTTCTTCTCG 
GGTTTTGGTT TGGGCACCAT TCTGGTTCCT ATGTTCGCTT TATTTTTTCC ATTACCCTTG 
GCCATTGCCG CAGCGGCAGT GGTGCATTTC ACAAACAACC TGTTCAAGTT TGCGCTGATG 
GCCCGGCAAG CAGATTGGAA GGTGGTGGCA CGCTTCGGAT TACCTGCCGC GTTGGCCGCC 
ATTCTGGGCG CGAGTTCCCT GGCGCTCTTT GACCGCTTGC CAGCGCTGTT GCATTACTCA 
TTGGCGGGCT TGGTTTTTGA GATTACTGCG GTGAAAGTAC TGATAGGCGG TCTGATAGCA 
CTATTTGCAA TGCTGGAACT ATCACATCGT TTTCAATCAC TGACTTTTTC CCGGCGTTGG 
CTCTCTCTTG GTGGGTTCCT ATCAGGCTTT TTTGGTGGGC TTTCGGGCAA TCAGGGAGCA 
TTACGTTCAG CATTTTTATT GAAAGCAGGC TTGTCCATGG AAGCCTTTGT CGCGACAGGG 
ATTGTTTCGG CGACAATCGT CGATGTTACA CGTCTCCTTG TGTATGGCAG TGCGATATCG 
GTAGGTCAAT TCGCTCAAAT TGAGACGCTG GCGTTGCCGG TGGCCGTTGG CACTCTTGCA 
GCCTTGATTG GCAGCCTTCT TGCCAAGCGT CTCCTGGAAA AGGTGACCTT GCCTGGTATT 
CAGATGTTGG TCGCAATCGC GATGTTGGGT GTAGGTTTCG CACTGATGTT GGGTGTGCTC 
TAG 

 

Protein sequence

MELLIIALVA MLTSGMTFFS GFGLGTILVP MFALFFPLPL AIAAAAVVHF TNNLFKFALM 
ARQADWKVVA RFGLPAALAA ILGASSLALF DRLPALLHYS LAGLVFEITA VKVLIGGLIA 
LFAMLELSHR FQSLTFSRRW LSLGGFLSGF FGGLSGNQGA LRSAFLLKAG LSMEAFVATG 
IVSATIVDVT RLLVYGSAIS VGQFAQIETL ALPVAVGTLA ALIGSLLAKR LLEKVTLPGI 
QMLVAIAMLG VGFALMLGVL