| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0555 |
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| Symbol | |
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| ID | 4602809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 684514 |
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| End bp | 688713 |
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| Gene Length | 4200 bp |
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| Protein Length | 1399 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779891 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_926434 |
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| Protein GI | 119773694 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0581373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTTTA AACTCTCTAA AATTGCGATG GCGTTACCCG TGTCAGCATT GGCATTTGCC
GTACATGCTA ACCAGCCTAC AGAAGAGCAG GCGACCTACG CGGTAACAGC AAAAAATCAA
TTGCTCAATA GAAAATCGGC CGAAGCCCAG TTAGGTAACA AATATTTCGT CATCTTAAAA
GACGAGCCTT TGGCACTGTA TCAGGGTGGG ATCCGCGGTC TGGCCGCGAC GAATGTCAAA
GCCTCTAAAC ATACCAACGT GAACGCCAAG GGTAAGCTGG ACGTCAACAG CAGTAAGTCC
ATTACCTATA CCAATTATTT GGTGAATCAG CAGAGCAAGG TGTTCAGCAA CATCAAATCG
ACCCTCAAGC GCGAAGTCCC CGTCCAGGCT GCTCATACCA TAGCCCTGAA CGCCCTGGTG
ATGGAACTAT CAGACGCCGA AGCGGTCATG CTGCGCAAAA TGCCCGGCGT GTTGGCTGTG
CAGAAAGATT CCTTCAAACA ATTACTGACA GACGTGGGGC CCACCCACGT CGGCGCCCCC
ATGGTCTGGA ACAATCCAGA GCTCGAGGGG AAGTCCAGGG GCGAAGGATT GGTTGTTGGT
GTCATTGATA CCGGCATTGC TTCCTACAAG AAAAAATTCT ATTCCTGGAG ACCGCCCACG
CCGAACGATT TTAACCCCGC TTTTGCCGAT GTCGGTGGTG ATGGATACGA TCATACCAAC
CCCTACGGCG AAGGTGTTTA CTTCGGCGAC TGTGTTCAAA ACGCCATTTG GTGTAACGAC
AAACTGGTCG GTGTAGTCTC ATTTGATGAC TACAAAATTG CTGTGCCAAG TTACGATTGG
CGCTACAACA CCGGGCAGGA CGACCAAGGC CATGGTACCC ATGTCGCCGC AACGGTGGCT
GGCAACGTGG TACTGAATGT GCCTTATGCC GTCTCTCAGA TAGTAGGCAC GGCACAACAG
CCGGGCTGGG AGACCACGAA CTCCATGTTC AATGTAAACG TGAGTGGTGT CGCACCCCAC
GCCAACATCA TCGCTTACCG TACCTGTGTA CCCGGTTATG GCTGCTCCGA CTCAATGGCC
ATCAAAGCCA TTGAGCATGC TATCGAAAAC AATGTCGATG TTATCAACTA TTCGGTTGGC
GGCAGTCCCT CATCCCCTTG GCAATCGGCC GATGCCCTGG CATTTTTGAG CGCCCGGGAA
GCTGGTTTAC ATGTGGCGGT AGCCGCGGGT AACAGTGGCC CAGAAGCCGA AACAGTCGGC
TCACCCGGAA ACTCCCCTTG GGTAACCACT GTTGCCGCTC TTAGCCATGG CCGCGATTAC
AGCGAAGAAA AAACTGCGGT CTTTTCCGGT GGCGAAGGTG CATTACCGGA AATGACAGGT
AAGGGCAAAA CCCTGGCATT GGAGACACCA ACCGCAATCG TTTATGCCGG TGATGTTGAA
AGCGAATACT ACCAACAGCA GCAGGGTGGT CCTGGTTATT GCTATGCCAG TGCCTATGGC
AACGGTTCTC TGCCTGCGTC GTATCAGGCC AACAATGTGG TTGGCAAGGT CGTGGTATGT
CGCCGTGGTG GCGAGTATAA CAGCGCACCT TTATCGCGTT TAAACAAGAG CATTGCAGCA
AAATATGCCG GAGCTGCAGG TCTGATTTTA ATTAACTCAG ATGATAACTT CGACGACGTG
GTGGGTGATT TTCATGGTAT CCCGGCTATC CACCTGAACA AGGCTGATGG TGATGCCCTG
CTTGAATGGC TGAATACGGG TGAAAACCAT ATGGTCAGTA TTTTGGGCAA CTCCGAGTTC
AACAATAATC TTGAAAAAGC GGACATTGCA GCGTCCTTTA CCTCTCGCGG TCCGGATTTT
GTAAACAAAG ACTATTTGGT TCCGGATGTG GGTGCGCCTG GTGTGGATAT CTACGCCAGC
AACATTGGCA CAGGAATGCA CTCCAGTCAG CTGGGCAACA TTGAAAAACA GCCGGGTGAC
TACATGCAAA TCTCCGGTAC TTCCATGGCA TCCCCCCATG TGGCAGGCAT GTATCTGCTG
ATGAAGGCGG CTCATCCTGA GTGGACACCC GCGGAAATGC AATCTGCCCT GATGACAACA
GCTGTCACTG AAGTCACCGA AAAACAATAC CAGTTTGATG AAGCAGGTAA TGTGGTGCGT
GATGAAAACG GCGTTGCACA GTTCGAAATG GTACGAGCCA ATAATCATGC CACTGGCGCT
GGCAGTGCCC GGGTGAATCT GGCGATTGAA GCTGGTCTGG TGATGAACGA AACAAAAGCT
GGCTACCTTG CCGCAGATCC GTTCGCACCT GAGTGGGCTC AAAAAGAGAT CCCCGGTTGG
CATGGTGAAC CCAGCCAGAT GAACATACCA AGCCTTTCCA AAGGCGAGTG CTTGATAGAG
TGTGCCTGGA CACGCACCTT TAAAGCCGTA AAGGATGGCA CTTGGTCAGT CAGTTTTGAT
GTATTCGATG AAGGTTTCAC CCTGACTGCC GACCAAACAT CCTTTAGCTT GAGCCAAGGT
GAAGAAGTCA CGTTACATTT CACCGCTGAA GCCAACTCCG CATTGGCAAA AGACTGGGTT
GACGCGCGTG TTATTTTGAC GCCCGATGAT GAGACAACAC CGGTTCAAAC ACTGCCTGTA
TCCATTAACT TTATCGCTGG TCTCGTGCCT GAATCTATTG AGATCACCGC CTCCCGTGAT
AATGACTCCG CCGCAGTAAA CGGCATTGTT ACCATTGGCA GCGACAATAT CCAGGTCAGT
AAATCGGGCA TTGCCAAAGC AGACATCTAT GAGTTTGAGG TACGTCGTGA CGCCACTAAT
GGTTCGATTC TGGCGAAGCT AAACGAAATG GATGATACCG TTTACGCGAT TCCGCTGAAC
ATTCAAGCCG ACAGTAAACG ACTCGTAATA GAGGTATTGG AAACAAGCTC ACCGGATCTG
GACCTGTATG TCGGGATTGA CGTTGACCTG GATGGTGCAC CAACGGGCAG CCCTTCCGAA
TTGCCGTTTG TTCGCTATAT TTCTGCAACT GAAAGTGCAT ATGAAAAAAT TGATGTTATC
GATCCGGCCA ACGACACCTA TTGGATCCTG GTTCACAACT GGGCAGAAGG CCCTGAAGCC
CTAACCGAAA ACCAGATGTT GTGCGAAGAG GGTCAGCAGC CCGACGAAGG CAAAGAGTGC
GTGTTTGAAG CACCAATTTT TGATTCGGTA AAGCTGGCAG TAACCAACGT ACAATATGAT
GACGACTCTA TGCAGGTAAA GGTTGCAGAC TCTGTTGCAC CACGTGAAGA ACTGGCAACA
CGCGTCAAGT GGGATCAATC CATGCTGGAA GGCGATTTGT ACCACAGCGT ATTCTGGCTG
GGCACCAACC CGGATCTGCC ACGCAATATA GGTGCCGTTC GCGTAAACAT GACCAGGGGG
GCAGATGATG TCACGGTTGC TCAGCCTCGC CTGGACGGTG ATTTACTGAC ATCCAGCATC
AAAATTGCCG CCAATCACAG TGGTGAGGAA CGAACCTACC AGATCAGTAT CAGTCTGGCG
CAAGACGTCT CTGTGGCCAG CTTGATAGCG GATGACTCAC CATCGGTCTC GACGATGCAG
ATGGCCACAG GTGATGTTGA ATACAAGTTT GAAGGCAATG TACTGTCCTG GACACAGACT
CAGCAAGACG GTGCTTCGGC GGTGACCTTT ACCCTCGTAT TGGACGCTTC CGAAGTGACA
GGTTTGGTGG ATATCACCCC GGTAGTGACA ACCCAGGTCA GTACCAGTGA AAACTCTGTC
AGGGCGGTAT CTGAAGGCCA AACTGTGATG TTTGAGGGAC GTCCAGTGTT CCAAGCCGTT
GCAGATAAAT CGACCGCGAA AAAAGGAGAC GTTGTTCGTC TTACCGCAAC CCCTGTCGAC
TTGGTGATCA GTGACCCAGA AATCAGCTAC ATTTGGAAAC AGGTGTCTGG TACTCAAGTC
GCGATAGTTG GTGCGGGCAC GGCTGCAATC TCTTTCACTG CACCTGAGCT GAAAAGTGCT
GAAGAAATTG TCTTCGAACT GGTCGGCAGT AACGGCAGTA AGCAATCTGC ACCGGTCGAG
ATTAGCGTGA ACGTTGAGGC CACCATTGAG CCACCTGTTG AGCAGGGTAA ATCAGGCGGA
AGCATGGGGT TTGGTTTGCT GCTACTGAGT GCCGCTGGTC TTTTAAGACG ACGTAAATAA
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| Protein sequence | MNFKLSKIAM ALPVSALAFA VHANQPTEEQ ATYAVTAKNQ LLNRKSAEAQ LGNKYFVILK
DEPLALYQGG IRGLAATNVK ASKHTNVNAK GKLDVNSSKS ITYTNYLVNQ QSKVFSNIKS
TLKREVPVQA AHTIALNALV MELSDAEAVM LRKMPGVLAV QKDSFKQLLT DVGPTHVGAP
MVWNNPELEG KSRGEGLVVG VIDTGIASYK KKFYSWRPPT PNDFNPAFAD VGGDGYDHTN
PYGEGVYFGD CVQNAIWCND KLVGVVSFDD YKIAVPSYDW RYNTGQDDQG HGTHVAATVA
GNVVLNVPYA VSQIVGTAQQ PGWETTNSMF NVNVSGVAPH ANIIAYRTCV PGYGCSDSMA
IKAIEHAIEN NVDVINYSVG GSPSSPWQSA DALAFLSARE AGLHVAVAAG NSGPEAETVG
SPGNSPWVTT VAALSHGRDY SEEKTAVFSG GEGALPEMTG KGKTLALETP TAIVYAGDVE
SEYYQQQQGG PGYCYASAYG NGSLPASYQA NNVVGKVVVC RRGGEYNSAP LSRLNKSIAA
KYAGAAGLIL INSDDNFDDV VGDFHGIPAI HLNKADGDAL LEWLNTGENH MVSILGNSEF
NNNLEKADIA ASFTSRGPDF VNKDYLVPDV GAPGVDIYAS NIGTGMHSSQ LGNIEKQPGD
YMQISGTSMA SPHVAGMYLL MKAAHPEWTP AEMQSALMTT AVTEVTEKQY QFDEAGNVVR
DENGVAQFEM VRANNHATGA GSARVNLAIE AGLVMNETKA GYLAADPFAP EWAQKEIPGW
HGEPSQMNIP SLSKGECLIE CAWTRTFKAV KDGTWSVSFD VFDEGFTLTA DQTSFSLSQG
EEVTLHFTAE ANSALAKDWV DARVILTPDD ETTPVQTLPV SINFIAGLVP ESIEITASRD
NDSAAVNGIV TIGSDNIQVS KSGIAKADIY EFEVRRDATN GSILAKLNEM DDTVYAIPLN
IQADSKRLVI EVLETSSPDL DLYVGIDVDL DGAPTGSPSE LPFVRYISAT ESAYEKIDVI
DPANDTYWIL VHNWAEGPEA LTENQMLCEE GQQPDEGKEC VFEAPIFDSV KLAVTNVQYD
DDSMQVKVAD SVAPREELAT RVKWDQSMLE GDLYHSVFWL GTNPDLPRNI GAVRVNMTRG
ADDVTVAQPR LDGDLLTSSI KIAANHSGEE RTYQISISLA QDVSVASLIA DDSPSVSTMQ
MATGDVEYKF EGNVLSWTQT QQDGASAVTF TLVLDASEVT GLVDITPVVT TQVSTSENSV
RAVSEGQTVM FEGRPVFQAV ADKSTAKKGD VVRLTATPVD LVISDPEISY IWKQVSGTQV
AIVGAGTAAI SFTAPELKSA EEIVFELVGS NGSKQSAPVE ISVNVEATIE PPVEQGKSGG
SMGFGLLLLS AAGLLRRRK
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