Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0539 |
Symbol | |
ID | 4602794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 665065 |
End bp | 665397 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639779875 |
Product | periplasmic divalent cation tolerance protein CutA |
Protein accession | YP_926419 |
Protein GI | 119773679 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1324] Uncharacterized protein involved in tolerance to divalent cations |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00953533 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00314697 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCACAGT CCATGGATGA CTATATCCTG GTTATGACCA CCTGCCCCTC AGAGGATGTC GGCCTTGCCA TTGCCAAACG TCTGGTGAGC AACAGCCTTG CTGCCTGTGT GCAGCAGGGT GGCCCTGTGA CGTCGGTGTA CCATTGGCAA GGGAAACTCT GTGAAGACAG GGAATATCCC TTATTCATCA AGACCCGGCG GGCACTGTAT GCCGAGGTGG AACGGGCGAT TTCTGAGCTG CATCCCTATG AGTTGCCTGA GATTATCGCG ACGCCCGTAA CCGAGGCCCT GCCCGGCTAT TTGAACTGGA TAAACGACAA TACACAATCA TGA
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Protein sequence | MAQSMDDYIL VMTTCPSEDV GLAIAKRLVS NSLAACVQQG GPVTSVYHWQ GKLCEDREYP LFIKTRRALY AEVERAISEL HPYELPEIIA TPVTEALPGY LNWINDNTQS
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