| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0505 |
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| Symbol | |
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| ID | 4602760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 619137 |
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| End bp | 619712 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779841 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_926385 |
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| Protein GI | 119773645 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.865724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAC AGGACATGGC GTTACTGATC CACGACGCCT TACTGTTGCC AGATGGACGG
CTTGAGTTGA GGATTGTTGA GCCGCGCTAT TTGCGCATGG TGGCAGAAGT GTTCAAAGGG
TTTTACCCTC TGGCATTCGC GATGCACAAG GCCAACGGTC ATCCACCTTG CTATCCTGAA
GCAACCCAAT GCGAGATCAT CGATTTTAAT CAGCTCGAAG ACGACACCCT GAGTATCATT
ATCGAAGGGC GTCAGCGGGT GGAGATTCTC TCTGCCAGGC AGGATAAAGA CCTGCTGTGG
AAGGTGAGAG CAGCCCCCTG TCACAACTGG GAAAAAGAGC CCATTGATGG CGAGTTCGAA
ATCATCAGTG CGGCGCTGGA GCAGTTTTAC CAGGTCAATC CGGATCTGTT TGGTCTTTAC
AGCGATGTGC ACCTTGAGGA TGCAGCCTGG GTTAGCCAGC GTTGGCTTGA GGTGTTGCCC
ATGTACAGCC AGGACAAATT CAAGCTGATT AATCAGCCGG ATTGTCACAA GGCCATGGAC
TTTGTGCTCA AGCTTATTAA GTCCCACGCC GGATAA
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| Protein sequence | MQSQDMALLI HDALLLPDGR LELRIVEPRY LRMVAEVFKG FYPLAFAMHK ANGHPPCYPE
ATQCEIIDFN QLEDDTLSII IEGRQRVEIL SARQDKDLLW KVRAAPCHNW EKEPIDGEFE
IISAALEQFY QVNPDLFGLY SDVHLEDAAW VSQRWLEVLP MYSQDKFKLI NQPDCHKAMD
FVLKLIKSHA G
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