| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0464 |
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| Symbol | |
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| ID | 4602719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 569094 |
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| End bp | 569942 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779800 |
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| Product | MSHA biogenesis protein MshO precursor |
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| Protein accession | YP_926344 |
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| Protein GI | 119773604 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.467537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.968118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCA CTGGGATTGG GTTACACGCA CGGGGGTTCA CCCTGGTGGA ATTGGTCACG
GTTATCCTGG TGCTGGGGGT ATTGGCCGTG GGGGTGAGCA GCTTCATCAT CTTTGGTACC
CGCATCTTTA TCGAATCTTC GGCCGTCGAG CAGGTCACAG GGGAGAGCCG TTATGCCATC
GAGCGCCTTA CCCGAGATAT TCGCCGCGCT TTGCCTGGCA GCCTGAGGCT CGTTGCCGGC
AGCGATGGCT CCGACAGCTG GCAATGTCTC GAAATGGTGC CTATTGCAGC GAGCACCAGC
TATGTGACAT TGGCCATATC GCCAGATGCT GCGGCGCAGC AGGCCAGAGT GATCCGTGAT
GGCGCCAACA CCGGCATTAT CGCCGGGCAA ATGGCTCATG TTTACCCCCT GATGGCGACA
GATGTTTACC CGCCGCCGAC GGGTGATACC GGCAAGCGCT TTGCCGTGAA GTCGGTGATA
GAGGGCGCCG ATTCGCTGGA GCTCAGTTTT GATACGCCGG TACGCTTCAG TCAGGGCTCA
CCGAGCCGCC GTATTTACTT CAGTCAGGAC GTGGTGAGTT ATTGTTTTAT CGAGCAGCTC
GCCAGTCATA ATATCAGCCT GTGGCGCTTC AATGGTTATG GTCTCAGTGC CATTCAACCC
GATGTGCCTG TCATGAGAGC TGCAGGGCGT TCGGCACTGA TGGCAAACGC AGTGACTACA
CCTGCGCCCA TCGCTTTGCT GGCGTCCACC CTGATAAACA ATGCCATGGT ACAACTGGAC
GTGGGCTTTG CCGTGAATGG CGAAACCTTC CAATATCAAC ATCAGGTACA TACAGCCAAT
GTCCCCTAA
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| Protein sequence | MRRTGIGLHA RGFTLVELVT VILVLGVLAV GVSSFIIFGT RIFIESSAVE QVTGESRYAI
ERLTRDIRRA LPGSLRLVAG SDGSDSWQCL EMVPIAASTS YVTLAISPDA AAQQARVIRD
GANTGIIAGQ MAHVYPLMAT DVYPPPTGDT GKRFAVKSVI EGADSLELSF DTPVRFSQGS
PSRRIYFSQD VVSYCFIEQL ASHNISLWRF NGYGLSAIQP DVPVMRAAGR SALMANAVTT
PAPIALLAST LINNAMVQLD VGFAVNGETF QYQHQVHTAN VP
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