Gene Sama_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0436 
Symbol 
ID4602691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp535310 
End bp535879 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID639779772 
Productputative lipoprotein 
Protein accessionYP_926316 
Protein GI119773576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG GATACTTAGG CATTCCCCTC ATCTTAGTGC TTGGCGGCTG CGCTACAGGC 
TCGACTCCCG AGGCCAAGAA GGCCAATGCC AGCAAAGAAA CCGCCGCTGC GCTGCAGGAT
ATCTATAAAG ATCATCCCAC AGCAAAGTCT GCGGTATCTT CCAGTTTGGG CTACCTGGTA
TGCACCGGCA GCGACAGTTA CCTGTTTGCG GCCTCTACCG GAGGGGGTAT CTGCACCTTC
ACTAGTGGTG GCCAGAGTGA ATACTACCGT TTCGCGTCCC TCGGTGCCGG GTTGGGGATA
GGGTTTAAAA AGGTGGCCTT CCTCTATACT TTCCACGATG CAGCGGCCAT GGAGCGTTTT
CGTACTGAGG GCTGGGATGC GGGTGCCCGT GCCGAAGCCA CGGCCCGGCA CGAGGAAGAG
GGGGGCCAGG TGGCGGCGAA TACTTCCTAC GATGTGGGCG GTGTGAAGGT GTTCCAGTCG
GCCATCTGGG GCGCTGCCGC CCAGGCCACG GTGCAGGGGT ATAAATTCTG GCCCACTGAC
TTTACCCAGG ATGTGACTGA ATACAATTAG
 
Protein sequence
MKIGYLGIPL ILVLGGCATG STPEAKKANA SKETAAALQD IYKDHPTAKS AVSSSLGYLV 
CTGSDSYLFA ASTGGGICTF TSGGQSEYYR FASLGAGLGI GFKKVAFLYT FHDAAAMERF
RTEGWDAGAR AEATARHEEE GGQVAANTSY DVGGVKVFQS AIWGAAAQAT VQGYKFWPTD
FTQDVTEYN