| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0428 |
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| Symbol | |
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| ID | 4602683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 524819 |
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| End bp | 527146 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779764 |
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| Product | peptidase M4, thermolysin |
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| Protein accession | YP_926308 |
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| Protein GI | 119773568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGC AACAACTCTC ACTCTTGTTT ATCGCCGTTT CGGCAACCCT GGGTACATCA
GCCTATGCCG CCAACGTAGT GGACGTGGCC AAGATGCGCC ACGCCACTGG CGACATCGGC
AGCGTACTGC AACTGGCTCC CGGCCACGAG TTCCGCACCG CAAAACAACT GGATCTGGGC
AAAGGCCTGA AAAAAGAGCG TCTGCAGCAA TACTTCCACG GAGTGCCTGT TTATGGTTTC
ACTGTGGCCG CTGATCGCTC TGAGATGGGT TTCTACAGCA ACCTCAAAGG CCAGATGCTG
GCCAATATCG ACAAGGATGC GGCTTTTGCC AAGCCCAGCC TGAGCAAAGA CAAAGCCCTG
GAAATCGCCA AGGCCGCCAA GGGTGGCCAT GGTCTTAAGG CCGGCAAGAC CCGTAACGAC
AGCGCCCAGC CATGGATCAT CCTGTACGGC AAAGCGCAGG AGCCACGACT GGTGTATATC
ACCTCTTACG TGGTTGATGG CGATACCCCA AGCCGTCCAT TCACCATGGT AGACGCCCAC
ACAGGTGAAG TACTGGAGCG CTGGGAAGGT CTGAACCATG CCGGCACAGG TACCGGCCCC
GGCGGTAACG CCAAAACCGG CCAGTATGAG TACGGCACTG ACTTCGGCAA CCTGGATGTG
GAAGTGAATG GTGACACCTG CACCATGAAC AATGCCAACG TGAAAACCGT GAACCTGAAC
CACGGCACCA GCGGCAATAC GGCATTCAGC TACACCTGCC CACGCAACAC GGTAAAAGAA
ATCAACGGTG CCTACTCACC GCTGAACGAT GCCCACTACT TCGGTGGCGT GGTGTATGAC
ATGTACGATC AGTGGTATGG CACAGCGCCC CTGTCCTTCC AGCTGACCAT GCGCGTGCAC
TACAGCAACA ACTATGAAAA CGCCTTCTGG GACGGCAGCG CCATGACCTT CGGTGATGGC
CAGAGCTACT TCTACCCACT GGTGTCTCTG GACGTATCAG CCCACGAAGT GAGCCACGGC
TTTACCGAAC AGAACTCGGG CCTGGTGTAT GCCAACCAAT CCGGTGGTAT GAACGAAGCC
TTCTCGGACA TGGCAGGTGA AGCGGCCGAA TTCTTTATGA AAGGCAGCAA CGACTGGCTG
GTTGGCGCCG ATATCTTCAA AGGCGATGGC GCACTGCGCT ACATGGCTGA CCCAACTCAG
GACGGCAAGT CTATCGGTCA TATCGACGAC TACTACGATG GTCTGGATGT GCACTACAGC
TCAGGTGTGT TCAATAAAGC CTTCTACACC CTGGCTACCA CCGAAGGCTG GGATACCCGC
AAAGCCTTTG AAGTCTTCGT TATCGCCAAC CAATTGTACT GGACGCCCAA CAGCCTGATG
TATGAAGGTG CCTGTGGCGT GAGAAATGCC GCCACCGATA AGGGCTACAG CACTGCTGAC
GTAGATGCAG CATTCGCAGC CGTGGGGATC ACCCCCTGCG AAGTTCCACC ACCACCGCCA
CCACCAGAAG CTGAGGTACT GCAAAATGGC GTAGCCGTGA CGGACATCAG CGGCGCTTCA
GGCAGCAAGC AGTATTGGAC TCTCGATGTC CCGGCCGGTG CCAGCAATCT GGTGTTCAAC
CTGTCCGGTG GCTCGGGCGA TGCCGACCTC TATGTGAAGT TTGGCGCCAA CCCAACCAGC
ACTGACTACG ATTGCCGCCC CTATGCAGCA GGCAACAATG AAAACTGTGC CATCAGCAAT
GTCCAGCAAG GTACTTACTG GGTGATGCTG AACGGCTACA GTTCGTACAG CGGCACGACC
CTGGTAGGCA GCTTCGATGG CGGCAGCACT GAGCCAAACG AAGCCCCGGT TGCCAGCTTC
ACCGCCGACT ACACGGGTGC CCTGTACAAT TTCACCAGCA CTGCTACCGA CTCTGACGGC
AACGTGGTCG CCTGGAGCTG GGACTTCGGT GACGGTGAAA CGGCTACCGG TTCTGCTGCA
AGCCATCAGT ATCTGGTGAG TGGCAGCTAC ACTGTCACCC TGACCGTTAC CGACGATGAT
GGCGCCACCG CCAGCACCTC TGAAGTGTTC AACGTGGAAG TGCCTGCCGC CGAGATGGAT
CTGAGCATCA CCAAGGTGAA CGTGTCACGC CGTGGCAGCG CCCGTATCGG TTTGGAATGG
ACAGGTAACA GCGCCTCTTA CACTGTGCTG CGTAACGGTG AAGCCGTCGG CACCACCAGC
GCCAACAGCT ATGTTGACCG CTTCACTGCC ACTGCCGGCA GCAGCGTCAC CTTCCAGGTG
TGCAACTCCG ATGGTGGTTG CTCCGACATT GAAACCGTAA GCTTCTGA
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| Protein sequence | MRKQQLSLLF IAVSATLGTS AYAANVVDVA KMRHATGDIG SVLQLAPGHE FRTAKQLDLG
KGLKKERLQQ YFHGVPVYGF TVAADRSEMG FYSNLKGQML ANIDKDAAFA KPSLSKDKAL
EIAKAAKGGH GLKAGKTRND SAQPWIILYG KAQEPRLVYI TSYVVDGDTP SRPFTMVDAH
TGEVLERWEG LNHAGTGTGP GGNAKTGQYE YGTDFGNLDV EVNGDTCTMN NANVKTVNLN
HGTSGNTAFS YTCPRNTVKE INGAYSPLND AHYFGGVVYD MYDQWYGTAP LSFQLTMRVH
YSNNYENAFW DGSAMTFGDG QSYFYPLVSL DVSAHEVSHG FTEQNSGLVY ANQSGGMNEA
FSDMAGEAAE FFMKGSNDWL VGADIFKGDG ALRYMADPTQ DGKSIGHIDD YYDGLDVHYS
SGVFNKAFYT LATTEGWDTR KAFEVFVIAN QLYWTPNSLM YEGACGVRNA ATDKGYSTAD
VDAAFAAVGI TPCEVPPPPP PPEAEVLQNG VAVTDISGAS GSKQYWTLDV PAGASNLVFN
LSGGSGDADL YVKFGANPTS TDYDCRPYAA GNNENCAISN VQQGTYWVML NGYSSYSGTT
LVGSFDGGST EPNEAPVASF TADYTGALYN FTSTATDSDG NVVAWSWDFG DGETATGSAA
SHQYLVSGSY TVTLTVTDDD GATASTSEVF NVEVPAAEMD LSITKVNVSR RGSARIGLEW
TGNSASYTVL RNGEAVGTTS ANSYVDRFTA TAGSSVTFQV CNSDGGCSDI ETVSF
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