| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0393 |
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| Symbol | |
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| ID | 4606034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 486460 |
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| End bp | 489684 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779729 |
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| Product | hypothetical protein |
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| Protein accession | YP_926273 |
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| Protein GI | 119773533 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACA CAGTGGCCAA GCGAAATACC CTGGTTTTCA CCGCCCTTAG CCTGAGCCTG
GGCCTTTATG GCTGCGGAGG AGGCGGTTCT TCCGACAGTG AAGGAGGCAC CACCACGCCA
CCCGCTGTCA CCCTGTACAC CGCCAAGGCC CAAAGTGGCA ATGGTGGTCA GCTGTCTCCC
GCCAGTCTCA GCATTGAAGC TGGCAAACAG GGTCGCTTCA CTGTAACCAC AAGCAGCGGC
TATACCCTGG ATACTATTGA AGGATGTGGC GGCACCTTGT CGGACAATGG CTACACCACC
GCAGCCATGG GCGCAGATTG CACCGTCAGC GCCAGCTTTA TCACCAATGC CGCCAACGCC
ATTCGCCACC GCGACCACAG CCTTGCCAGT GACGCCGAGC TTATCACTCA CGCAAGAGAC
GCCGTTGCTG CGGCCGAGAA CGCACGCAAG GCACTGGTCG ATGACTTGTA TCGGGGCATT
TCCCACATCA GCTGGCACCC AAGCCACGAC TCCATCACCT TCACCAGCTT CCAGCCGGAA
CGCACCCACA GCTTACTGCC CGCCAATAAA GATGGCAGCG GTAACAGCGC CAATCGTGGC
CTGGTGATGG TGTCACAAGA CGGTGAGTAC CACAGCGCTG CCATGGCAGC AAACCTGTTT
TCGGTCAGCA CCTCCACTGA AACCGATATG CTGCTCAAAC GCCTCATTGG CTGGCTCACC
AAGGGCGCCG ACCAAACCGA TGGCCTCAGC ATAGTCACGG CGCAAATGCC AAGTCGCGCC
GACAGCTGGT ACTTCCCCCA TAACGAAGGG ATCCGCACCT GGCTGGCGAA CAACTATGCC
AACACCCACA GCATTAACGA TGCTAATGTC TGTGATTACA ACGAATTATC TACTTGCATA
GACAACCTCA AGCCCGACCT GATTATCCTG TCGGACATAG ACCGCCAATC GCTTGGTCAT
GAGGGCATAG CCGCGGCCGT CACCAAGGCG AAGGCCGCGG GGATCCCGCT GCTGCTGTCC
AACTACTGGC GTGAAGCCAG CCCTATGCTC AGCCCGCTGT ATCAGCAAAT GGGGCTGGTG
ACTTACGGCA ACTATTGGTC AAAACTCAAT GCCGAGAACC TGGCCGTGAG CGACATCCGC
GCCAGCGATG CCAACCTGGC AGCAGTCGAC CGCCTGCTGG CCAACCTCGG CTCAGGTAAC
TTCGATACGG CACTGCTGGC CAACTGTGGC GGCAACTTCC TTTCATGTGA TGAGGAAGGG
TTTGTCGACG CCTTCAAAGC CGGTGCCGAC TGGCTGAGAG GCGCCGCCAT TACCCTCGAC
AATATGGGCC AGGATGCCTT GGCGCTGAGT GGTGCAGACA CCCTGCATGC TGCCGTGCTG
CTTGCCGACA AATACCGCGC TGCCATCGAC TACCCCATCG GCTGGGAAGA ACCGCAAAGC
TGGCAACAGG CCATGTTCGC CGACTGGCTG GTAAACTATG CCCGCACCGA CAACCCGGCT
CAGCCCGACC TCGGTGAGTA CGTGACCGAC AGGAACAATC TCGCCAAAGG TAGCCACGCC
AGTTACGCCC ACCCGGCCAC AGTCACCGAA CGCAAGACCA TAGGCGTGCC CTACCCCAAC
CAGTGGACCA CCACCGGTTG GTATGTGTTG CCGGGGCAAA CGGTGATCCT GAAGCGACTG
GATAACAGCG ATGCGCGGGT GGAAATCAAA CTCAACTACC ACAGACGCAA CACCAACCGC
GCCTTCGAGC AAAAGGTGTA CCGGGCGCCA CTGGAGCTGG CAACCCAGCG CCTGCGACTG
GAAAAGGGCG AAAGCATCAG CTTTTCAAGC CCCTATGGTG GTCCTCTGTA CCTGTATCTG
GGTGGCAGCG GTGAAGCCCT GAGCACAGAC ATCAGTGCCA GCGGCGTGAC CCGTCATCCG
GCTATCATGA ATTTCAGCGA TGCCAGTCAA ATCACCGCCT TCAATGAGCG CCTGAGCCAG
ACCGAACTGC CCCATGTGGA TTTGCGTACC GATGGCGCCG AGCAGCATAT GCGCCGCGAC
CGCTTTACCA ATGCCATCGG CGGCGCCGTG GCCGATGTGA ATGCACTGCT TGAGAGCATC
TCTGAAGATC ATATCAATGC GGTCTACACC CTGGCCGGCT TTAAAATTCA GGGCAAAACC
CTGGCTGAAT CTCTGCCTGC CGATGTGAAC GCCGCCTGCG CGAATCTACT TGGCAACGCG
TGTCTTGATG AAACCCTGCA TACCCGTAAA ATCATTCAGC ACGCCAACTA CGACCAGAAC
GCCCACTGCG GCGCCGGTTG CAGCGGCAAC CCCTGGGATG CGGCCTGGAA CATCAGCCCA
ACCGGCTGGG GCGATAACCA CGAACTGGGC CACAACCTGC AAACCAACCG CCTCAATGTG
CAATATGCTG CCGCAGGCGA CGGAGACAAC TGGGCCGGTT ACGGCAGCCG CGCCGGGGAG
AACTCCAACA ATATCTTCCC CTACGTGGTG AAATGGCAGG CTCATTATCT GCGTGACGGC
AACACCACGC CCATCACCGA TGGCCATATG AACCATAAAG ATTTGTTTTA TGTGTTTATG
TCGGATGCGG CTGGCGTGAA AGACAGCAGC GGCAACCGGG TGGTGCTGGG CGCAAATTGC
AAGGTGCTGG ACGCGGGTAG CGACCGTTAC GAAGCCCCCT GGAGGAGCAA CGACTATGCG
GTGCACAACG GCTATCGGAT GGCGTTTTAC ATCCAGATGG CGCTGCGCGC CCACGGCATG
TTGCTCTCCG ATGGCACCCG TCTGGCCAAT GGTTTCAACA TCTTTACCCT GCTGTACCAA
CACCAGCGCA TCTTTGGTTC CTTAAGTGGT AATCAGGCCG ATTGGGATGC CAATAAAGAC
CGCCTCGGTT TTGGCCTGTA CCCTTACAGC GGCCACGCCG TCTACGGTGG TCGCACCGTG
GCGGGCATTC CGGGCAACGA CTTTATGCTG GTGTCGTTAA GCAAGCTCAC CGGCATCAAC
TGGCAGAGCC ACTTCGATAT GCTGGGGCTG CGCTACTCAA GCCTCGCGGC CACCCAGGCC
CAGGCCAATG CCACCAAGGG CAGCCTGCCG ATGGGCATGT ATGTGCTGGA GACAGACCTG
CCGCCAGCCA ACATGAGTGA AGGCCTGAGC TTCCTGCCGC TGTCACTCTC AGATGCCAGC
ACCCAGTGGC GCGATGGCAG ATCACCGGCA AGTTGCAGTT TGTAA
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| Protein sequence | MRNTVAKRNT LVFTALSLSL GLYGCGGGGS SDSEGGTTTP PAVTLYTAKA QSGNGGQLSP
ASLSIEAGKQ GRFTVTTSSG YTLDTIEGCG GTLSDNGYTT AAMGADCTVS ASFITNAANA
IRHRDHSLAS DAELITHARD AVAAAENARK ALVDDLYRGI SHISWHPSHD SITFTSFQPE
RTHSLLPANK DGSGNSANRG LVMVSQDGEY HSAAMAANLF SVSTSTETDM LLKRLIGWLT
KGADQTDGLS IVTAQMPSRA DSWYFPHNEG IRTWLANNYA NTHSINDANV CDYNELSTCI
DNLKPDLIIL SDIDRQSLGH EGIAAAVTKA KAAGIPLLLS NYWREASPML SPLYQQMGLV
TYGNYWSKLN AENLAVSDIR ASDANLAAVD RLLANLGSGN FDTALLANCG GNFLSCDEEG
FVDAFKAGAD WLRGAAITLD NMGQDALALS GADTLHAAVL LADKYRAAID YPIGWEEPQS
WQQAMFADWL VNYARTDNPA QPDLGEYVTD RNNLAKGSHA SYAHPATVTE RKTIGVPYPN
QWTTTGWYVL PGQTVILKRL DNSDARVEIK LNYHRRNTNR AFEQKVYRAP LELATQRLRL
EKGESISFSS PYGGPLYLYL GGSGEALSTD ISASGVTRHP AIMNFSDASQ ITAFNERLSQ
TELPHVDLRT DGAEQHMRRD RFTNAIGGAV ADVNALLESI SEDHINAVYT LAGFKIQGKT
LAESLPADVN AACANLLGNA CLDETLHTRK IIQHANYDQN AHCGAGCSGN PWDAAWNISP
TGWGDNHELG HNLQTNRLNV QYAAAGDGDN WAGYGSRAGE NSNNIFPYVV KWQAHYLRDG
NTTPITDGHM NHKDLFYVFM SDAAGVKDSS GNRVVLGANC KVLDAGSDRY EAPWRSNDYA
VHNGYRMAFY IQMALRAHGM LLSDGTRLAN GFNIFTLLYQ HQRIFGSLSG NQADWDANKD
RLGFGLYPYS GHAVYGGRTV AGIPGNDFML VSLSKLTGIN WQSHFDMLGL RYSSLAATQA
QANATKGSLP MGMYVLETDL PPANMSEGLS FLPLSLSDAS TQWRDGRSPA SCSL
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