Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0385 |
Symbol | |
ID | 4602641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 477268 |
End bp | 477888 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639779722 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_926266 |
Protein GI | 119773526 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.894692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA TTAAAGTCAG TTATTTCGAT GTTGATGGCG GCCGCGGCGA GCCAATCCGT ATCGTACTCC ACGCCGCCGG CATCCCGTTT GAGGATTTCC GTTTCGGCTA TGGTGAATTT GCCGACGTGC GGAAAACCAC GCCACTGGGC CAGGTACCCA CTGTCAACAT AGAGGGAGTG CAGTACACCC AGTCGAGTGC TTTACTGCGC TATTTTGGCA AGGCGGCCGA CCTTTATCCC CAGGACCCGT TTCAGGCGCT GCTGTGCGAT GAAATCATAG ATGGCTCTGA AGACCTCACC AATAAACTGG TCGCCAGCTT CGGCCTGCAG GGTGATGCCC TCAAGAGTGC CCGTGAAGCC TTTGTCACCG GTCCCCTGAC CCTGTACCTG GGTTGGATGG CACAAAAGCT TGCCGCGCAG GGTAACTACT TCGCCAACGG CAAGCTGACC ATAGCGGATC TGAAGGTGTT TATGTTGCTG CGCTGGCTGG GTTCGGGACA GCTTGATCAT ATTCCGACAG ACAGCGTCAC GCGTATCGCG CCCTCCCTTC AAGCCTATGC AGAGCGCATC GGTGCCGACC CTGTGGTTAG CTCTTACTAT CAGGCCCGCG CGGCCAAATA G
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Protein sequence | MSQIKVSYFD VDGGRGEPIR IVLHAAGIPF EDFRFGYGEF ADVRKTTPLG QVPTVNIEGV QYTQSSALLR YFGKAADLYP QDPFQALLCD EIIDGSEDLT NKLVASFGLQ GDALKSAREA FVTGPLTLYL GWMAQKLAAQ GNYFANGKLT IADLKVFMLL RWLGSGQLDH IPTDSVTRIA PSLQAYAERI GADPVVSSYY QARAAK
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