| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0335 |
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| Symbol | |
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| ID | 4602591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 403271 |
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| End bp | 404839 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779664 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_926216 |
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| Protein GI | 119773476 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACA GAGTCATCAT TTTTGATACT ACCCTGAGAG ACGGTGAGCA GGCGCTGGCT
GCGAGTCTTT CGGTAAAAGA AAAATTGCAG GTGGCTCTGG CCCTTGAACG TTTGGGCGTG
GATGTGATGG AAGTGGGCTT TCCCGTATCC TCTCCCGGTG ATTTTGAATC AGTGCAAACC
ATTGCCCGCC ATATTAAAAA CAGTCGAGTG TGTGCTTTGT CGCGGGCGCT GGAAAAAGAC
ATAGACGCTG CCGCCCAGGC ATTGTCTGTG GCTGAGCAGT TCCGAATTCA CACCTTTATT
TCCACCTCCA ATATCCACGT AGAGAGCAAG CTCAAGCGCT CATTTGATCA AGTGCTGGAC
ATGGCCGTTG GTGCGGTGAA ATACGCCCGC CGCTTTACCG ATGACGTGGA ATTCTCCTGT
GAAGATGCGG GCCGCACGCC AATTGATAAC CTGTGCCGCA TGGTCGAAGC GGCCATTAGT
GCCGGTGCCC GCACCATCAA TATTCCTGAC ACCGTTGGCT ATACAGTACC CAGCGAATTT
GGCGGCATCA TCCAGACCCT GTTCAATCGT GTGCCCAATA TCGATCAGGC GGTGATCTCA
GTGCACTGCC ACGACGACCT GGGGCTGTCG GTCGCCAACT CTATCGCCGC AGTGCAGGCC
GGTGCTCGCC AGATTGAATG TACCGTGAAC GGTATCGGCG AGCGCGCCGG TAACTGCTCG
TTGGAAGAAA TCGCTATGAT CTTGGCCACC CGCAAAGACA TGCTGGGTCT GTATACCAAT
ATCAATGCCC GTGAAATTCA TCGCACCTCA TCACTGGTCA GCCAGCTGTG CAACATGCCC
ATTCAGCCCA ACAAGGCGAT TGTCGGCTCC AATGCCTTTA CCCACTCATC AGGTATTCAC
CAGGACGGCA TGTTAAAGGC GCAAAACACC TATGAAATCA TGACGCCAGA GAGTATTGGT
CTGAACCGTA ACAACCTGAA TATGACCTCG CGTTCCGGTC GTCACGTGAT TAAACACCGC
ATGGAAGAAA TGGGTTACGG CGCCGGTGAT TACGATATGG ATACCCTGTA CGCCGCCTTC
CTGAAGTTGG CCGACAAAAA GGGCCAGGTA TTCGACTACG ATCTGGAAGC GTTGGCCTTT
ATGGAGGCGC AGGCCGAGGA TGACGATCAT TATGTGATGG AGCAATTGGT AGTGCAGTCA
GACTCTACCG AAGGCAAGGC TACCGCTACT GTGCGCATGC GCGTCGGGGA CGAGGTCATC
ACCGAGGCCG CTACCGGTAA TGGTCCGGTC GATGCCGCCT ATAACGCCAT CGCCCGCGCA
ACCCATCGCA CCATTAATAT CAGCAGCTAC AAGCTTGGTG CCAAAGGCGA GGGGCAAAAT
GCCCTGGGTC AGGTAGACAT TACTGCCCGC TACGATGACC GTAACTTCCA CGGCGTGGGA
TTGGCCACCG ATGTAGTTGA GGCCTCGGCT CAGGCGCTGG TCCACGTCAT GAACCTGACC
TGGCGCGCCG ACAAGGTCGC CTATTGCAAG CAGCAGATGC AGCAAACCCG TGAGCTTGGC
GGCGTTTAA
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| Protein sequence | MSDRVIIFDT TLRDGEQALA ASLSVKEKLQ VALALERLGV DVMEVGFPVS SPGDFESVQT
IARHIKNSRV CALSRALEKD IDAAAQALSV AEQFRIHTFI STSNIHVESK LKRSFDQVLD
MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEAAIS AGARTINIPD TVGYTVPSEF
GGIIQTLFNR VPNIDQAVIS VHCHDDLGLS VANSIAAVQA GARQIECTVN GIGERAGNCS
LEEIAMILAT RKDMLGLYTN INAREIHRTS SLVSQLCNMP IQPNKAIVGS NAFTHSSGIH
QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYGAGD YDMDTLYAAF
LKLADKKGQV FDYDLEALAF MEAQAEDDDH YVMEQLVVQS DSTEGKATAT VRMRVGDEVI
TEAATGNGPV DAAYNAIARA THRTINISSY KLGAKGEGQN ALGQVDITAR YDDRNFHGVG
LATDVVEASA QALVHVMNLT WRADKVAYCK QQMQQTRELG GV
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