| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0313 |
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| Symbol | |
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| ID | 4602569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 378604 |
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| End bp | 379386 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639779642 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_926194 |
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| Protein GI | 119773454 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTTT GGGCGCTTTT TTCAGGCGCA TTTGCGCAGG TCTGGTACAT CTTTCCGCTT
GTCGCCGTTG CGCTGATCTT TAAGAGTCGC TGGTTTAAAG GAGTCTTCGG CGAGTTTTTG
GTCAACAGAC AATTATCCGG ATTGGCTCAA GCATCTGACG GTGACTATAC GCTGGTAAAG
GATGTGACCC TGCCGACCGA GGATGGCACC ACCCAGATTG ACCATGTTCT GGTCTCCAGG
TTTGGGGTGT TTGTGGTGGA AACCAAGAAC ATGAAGGGCT GGATTTATGG TTCTGTAAAC
CAGCGGCAAT GGACACAGAA AATCTATCGC CATTCCTCCA AATTTCAGAA TCCGCTGCAT
CAAAACTATA AACATGTGAA AACGCTGGAG TCACTGTTAG GCATCGGCAT TGAGAAACTG
CATTCTGTGA TTGTGTTCAT TGGTGACAGC ACCTTTAAGA CCGAGATGCC GGATAACGTG
ACCTATGCCA GTGGCTGCGT GCGTCACATC AAAACCTTCG AGCAGGTCGT ATTTTCTGAT
GAGGAGTATC ACAGCCTCAT TGCGCGGATT GAAGAGATTA AGTTAAAGCG TGGCCTTGTC
ACTGATATCA AGCACAGACA CCATGTGAAA GCGCTGGTAG CCTGCAAAAG CCAGAACAAG
CAGTGTGTTC GCTGTGGCTC AGAAATGGTG ATGCGGGAGT CAAAGCGTGG CGACAACAAA
GGCAAGCGAT TTTGGGGATG CTCTTCGTAC CCTAAATGCA GGGCTATTGA AGAACTGAGT
TGA
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| Protein sequence | MDFWALFSGA FAQVWYIFPL VAVALIFKSR WFKGVFGEFL VNRQLSGLAQ ASDGDYTLVK
DVTLPTEDGT TQIDHVLVSR FGVFVVETKN MKGWIYGSVN QRQWTQKIYR HSSKFQNPLH
QNYKHVKTLE SLLGIGIEKL HSVIVFIGDS TFKTEMPDNV TYASGCVRHI KTFEQVVFSD
EEYHSLIARI EEIKLKRGLV TDIKHRHHVK ALVACKSQNK QCVRCGSEMV MRESKRGDNK
GKRFWGCSSY PKCRAIEELS
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